RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 NSFL1CQ9UNZ2 370 aaKnown RBP14.97□□□□□ -0.01
CACNB3-217ENST00000550483 APLP1P51693 650 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 GPSM2P81274 684 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 HTRA3P83110 453 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 CCDC129Q6ZRS4 1044 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 MAGEB6Q8N7X4 407 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 TDRD7Q8NHU6 1098 aaKnown RBP14.96□□□□□ -0.01
CACNB3-217ENST00000550483 TBC1D22AQ8WUA7 517 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 TTC14Q96N46 770 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 PUS7LQ9H0K6 701 aaKnown RBP14.96□□□□□ -0.01
CACNB3-217ENST00000550483 PDRG1Q9NUG6 133 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
CACNB3-217ENST00000550483 C10orf71Q711Q0 1435 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 PDIA4P13667 645 aaKnown RBP14.95□□□□□ -0.02
CACNB3-217ENST00000550483 IL1R1P14778 569 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 GSTO1P78417 241 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 TBC1D16Q8TBP0 767 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 NEK1Q96PY6 1258 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
CACNB3-217ENST00000550483 RAI14Q9P0K7 980 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 MAST2Q6P0Q8 1798 aa14.95□□□□□ -0.02
CACNB3-217ENST00000550483 PATL2C9JE40 543 aaKnown RBP14.94□□□□□ -0.02
CACNB3-217ENST00000550483 CD2BP2O95400 341 aaKnown RBP14.94□□□□□ -0.02
CACNB3-217ENST00000550483 CYP21A2P08686 494 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 RPS6KB1P23443 525 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 NT5C2P49902 561 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 CUL4AQ13619 759 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 GIMAP6Q6P9H5 292 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 SLF2Q8IX21 1173 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 STRBPQ96SI9 672 aaKnown RBP14.94□□□□□ -0.02
CACNB3-217ENST00000550483 COA1Q9GZY4 146 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 ABCF2Q9UG63 623 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 TAF1P21675 1872 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 LTBP1Q14766 1721 aa14.94□□□□□ -0.02
CACNB3-217ENST00000550483 COL1A1P02452 1464 aaPredicted RBP14.94□□□□□ -0.02
CACNB3-217ENST00000550483 WDR19Q8NEZ3 1342 aa14.93□□□□□ -0.02
CACNB3-217ENST00000550483 ZNF213O14771 459 aa14.93□□□□□ -0.02
CACNB3-217ENST00000550483 LDHCP07864 332 aa14.93□□□□□ -0.02
CACNB3-217ENST00000550483 CYP7A1P22680 504 aa14.93□□□□□ -0.02
CACNB3-217ENST00000550483 NAA16Q6N069 864 aaPredicted RBP14.93□□□□□ -0.02
CACNB3-217ENST00000550483 MPNDQ8N594 471 aa14.93□□□□□ -0.02
CACNB3-217ENST00000550483 TMX3Q96JJ7 454 aa14.93□□□□□ -0.02
CACNB3-217ENST00000550483 SUGT1Q9Y2Z0 365 aa14.93□□□□□ -0.02
CACNB3-217ENST00000550483 C6orf229H3BNL8 230 aa14.92□□□□□ -0.02
CACNB3-217ENST00000550483 KLRK1P26718 216 aa14.92□□□□□ -0.02
CACNB3-217ENST00000550483 DDIT3P35638 169 aa14.92□□□□□ -0.02
CACNB3-217ENST00000550483 NUCB2P80303 420 aa14.92□□□□□ -0.02
CACNB3-217ENST00000550483 DPP8Q6V1X1 898 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-217ENST00000550483 FBXL16Q8N461 479 aa14.92□□□□□ -0.02
CACNB3-217ENST00000550483 SUPT20HQ8NEM7 779 aa14.92□□□□□ -0.02
CACNB3-217ENST00000550483 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-217ENST00000550483 CD209Q9NNX6 404 aa14.92□□□□□ -0.02
CACNB3-217ENST00000550483 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-217ENST00000550483 COL11A2P13942 1736 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-217ENST00000550483 MAGEB6P1A0A0J9YX57 407 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 MBD4O95243 580 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 FGAP02671 866 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 CHGBP05060 677 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 LDHBP07195 334 aaKnown RBP14.91□□□□□ -0.02
CACNB3-217ENST00000550483 AK2P54819 239 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 TRDNQ13061 729 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 ADCK5Q3MIX3 580 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 DHX32Q7L7V1 743 aaKnown RBP14.91□□□□□ -0.02
CACNB3-217ENST00000550483 DZIP1Q86YF9 867 aaKnown RBP14.91□□□□□ -0.02
CACNB3-217ENST00000550483 ZNF622Q969S3 477 aaKnown RBP eCLIP14.91□□□□□ -0.02
CACNB3-217ENST00000550483 ZC3H12CQ9C0D7 883 aaKnown RBP14.91□□□□□ -0.02
CACNB3-217ENST00000550483 NAPBQ9H115 298 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 IQSEC3Q9UPP2 1182 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-217ENST00000550483 FAM205AQ6ZU69 1335 aa14.91□□□□□ -0.02
CACNB3-217ENST00000550483 MYH13Q9UKX3 1938 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 APPP05067 770 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
CACNB3-217ENST00000550483 SOGA3Q5TF21 947 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 NCOA7Q8NI08 942 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 NSUN4Q96CB9 384 aaKnown RBP14.9□□□□□ -0.02
CACNB3-217ENST00000550483 NOL10Q9BSC4 688 aaKnown RBP14.9□□□□□ -0.02
CACNB3-217ENST00000550483 MTA3Q9BTC8 594 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 CNNM2Q9H8M5 875 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 NMRK2Q9NPI5 230 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 POLLQ9UGP5 575 aa14.9□□□□□ -0.02
CACNB3-217ENST00000550483 KIAA1551Q9HCM1 1747 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 E7EWF7 191 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 TOMM70O94826 608 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 BAG3O95817 575 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 CHAF1AQ13111 956 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-217ENST00000550483 SLFNL1Q499Z3 407 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 RALYLQ86SE5 291 aaKnown RBP14.89□□□□□ -0.03
CACNB3-217ENST00000550483 TXNRD3Q86VQ6 643 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 IFNL3Q8IZI9 196 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 RTFDC1Q9BY42 306 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-217ENST00000550483 RNF41Q9H4P4 317 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-217ENST00000550483 SLC4A4Q9Y6R1 1079 aa14.89□□□□□ -0.03
CACNB3-217ENST00000550483 FOXP2O15409 715 aa14.88□□□□□ -0.03
CACNB3-217ENST00000550483 PLCG2P16885 1265 aa14.88□□□□□ -0.03
CACNB3-217ENST00000550483 MECOMQ03112 1051 aa14.88□□□□□ -0.03
CACNB3-217ENST00000550483 PODNQ7Z5L7 613 aa14.88□□□□□ -0.03
CACNB3-217ENST00000550483 RIOK1Q9BRS2 568 aaKnown RBP14.88□□□□□ -0.03
CACNB3-217ENST00000550483 AGXT2Q9BYV1 514 aa14.88□□□□□ -0.03
CACNB3-217ENST00000550483 CRNKL1Q9BZJ0 848 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms