RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 EXOSC6Q5RKV6 272 aaKnown RBP8.09□□□□□ -1.11
CCDC38-206ENST00000548771 RNF43Q68DV7 783 aa8.09□□□□□ -1.11
CCDC38-206ENST00000548771 ALKBH8Q96BT7 664 aaKnown RBP8.09□□□□□ -1.11
CCDC38-206ENST00000548771 RBCK1Q9BYM8 510 aa8.09□□□□□ -1.11
CCDC38-206ENST00000548771 CLEC4MQ9H2X3 399 aaPredicted RBP8.09□□□□□ -1.11
CCDC38-206ENST00000548771 LIN7BQ9HAP6 207 aa8.09□□□□□ -1.11
CCDC38-206ENST00000548771 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
CCDC38-206ENST00000548771 HIF3AQ9Y2N7 669 aa8.09□□□□□ -1.11
CCDC38-206ENST00000548771 CPNE3O75131 537 aaKnown RBP8.08□□□□□ -1.12
CCDC38-206ENST00000548771 BMP3P12645 472 aa8.08□□□□□ -1.12
CCDC38-206ENST00000548771 ITPKAP23677 461 aa8.08□□□□□ -1.12
CCDC38-206ENST00000548771 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
CCDC38-206ENST00000548771 SOWAHDA6NJG2 315 aa8.07□□□□□ -1.12
CCDC38-206ENST00000548771 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-206ENST00000548771 PCDH1Q08174 1060 aa8.07□□□□□ -1.12
CCDC38-206ENST00000548771 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-206ENST00000548771 SART1O43290 800 aaKnown RBP8.06□□□□□ -1.12
CCDC38-206ENST00000548771 CTSBP07858 339 aa8.06□□□□□ -1.12
CCDC38-206ENST00000548771 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
CCDC38-206ENST00000548771 NUTM2GQ5VZR2 741 aa8.06□□□□□ -1.12
CCDC38-206ENST00000548771 DTX1Q86Y01 620 aa8.06□□□□□ -1.12
CCDC38-206ENST00000548771 GLIS3Q8NEA6 775 aa8.06□□□□□ -1.12
CCDC38-206ENST00000548771 DBNDD2Q9BQY9 259 aa8.06□□□□□ -1.12
CCDC38-206ENST00000548771 NPHS2Q9NP85 383 aa8.06□□□□□ -1.12
CCDC38-206ENST00000548771 EIF1AYO14602 144 aaKnown RBP8.05□□□□□ -1.12
CCDC38-206ENST00000548771 GSTM4Q03013 218 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 PRPF40BQ6NWY9 871 aaKnown RBP8.05□□□□□ -1.12
CCDC38-206ENST00000548771 FDX2Q6P4F2 183 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 BEND4Q6ZU67 534 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 CCDC74AQ96AQ1 378 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 TRIM56Q9BRZ2 755 aaKnown RBP8.05□□□□□ -1.12
CCDC38-206ENST00000548771 USP26Q9BXU7 913 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 ZNF576Q9H609 170 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 CYP4F12Q9HCS2 524 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 ADGRE2Q9UHX3 823 aa8.05□□□□□ -1.12
CCDC38-206ENST00000548771 B3GALT4O96024 378 aa8.04□□□□□ -1.12
CCDC38-206ENST00000548771 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
CCDC38-206ENST00000548771 DMRTB1Q96MA1 342 aa8.04□□□□□ -1.12
CCDC38-206ENST00000548771 ABCB6Q9NP58 842 aa8.04□□□□□ -1.12
CCDC38-206ENST00000548771 BRD1O95696 1058 aa8.03□□□□□ -1.12
CCDC38-206ENST00000548771 WNT11O96014 354 aa8.03□□□□□ -1.12
CCDC38-206ENST00000548771 DRD2P14416 443 aa8.03□□□□□ -1.12
CCDC38-206ENST00000548771 MAP4P27816 1152 aaKnown RBP8.03□□□□□ -1.12
CCDC38-206ENST00000548771 HOXA10P31260 410 aaPredicted RBP8.03□□□□□ -1.12
CCDC38-206ENST00000548771 GRIK1P39086 918 aa8.03□□□□□ -1.12
CCDC38-206ENST00000548771 INTS5Q6P9B9 1019 aaKnown RBP8.03□□□□□ -1.12
CCDC38-206ENST00000548771 C12orf50Q8NA57 414 aaPredicted RBP8.03□□□□□ -1.12
CCDC38-206ENST00000548771 C2CD4AQ8NCU7 369 aaPredicted RBP8.03□□□□□ -1.12
CCDC38-206ENST00000548771 SHKBP1Q8TBC3 707 aa8.03□□□□□ -1.12
CCDC38-206ENST00000548771 CSRNP1Q96S65 589 aa8.03□□□□□ -1.12
CCDC38-206ENST00000548771 SOX4Q06945 474 aaPredicted RBP8.02□□□□□ -1.13
CCDC38-206ENST00000548771 DSC3Q14574 896 aa8.02□□□□□ -1.13
CCDC38-206ENST00000548771 CDPF1Q6NVV7 123 aa8.02□□□□□ -1.13
CCDC38-206ENST00000548771 EZH1Q92800 747 aaPredicted RBP8.02□□□□□ -1.13
CCDC38-206ENST00000548771 EHD4Q9H223 541 aa8.02□□□□□ -1.13
CCDC38-206ENST00000548771 KCNF1Q9H3M0 494 aa8.02□□□□□ -1.13
CCDC38-206ENST00000548771 CYP11A1P05108 521 aa8.01□□□□□ -1.13
CCDC38-206ENST00000548771 MAOBP27338 520 aa8.01□□□□□ -1.13
CCDC38-206ENST00000548771 POU4F3Q15319 338 aa8.01□□□□□ -1.13
CCDC38-206ENST00000548771 GSX1Q9H4S2 264 aaPredicted RBP8.01□□□□□ -1.13
CCDC38-206ENST00000548771 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
CCDC38-206ENST00000548771 ECEL1O95672 775 aa8□□□□□ -1.13
CCDC38-206ENST00000548771 RPS26P11Q5JNZ5 115 aaPredicted RBP8□□□□□ -1.13
CCDC38-206ENST00000548771 TMC7Q7Z402 723 aa8□□□□□ -1.13
CCDC38-206ENST00000548771 ABI1Q8IZP0 508 aa8□□□□□ -1.13
CCDC38-206ENST00000548771 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
CCDC38-206ENST00000548771 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
CCDC38-206ENST00000548771 GAS2O43903 313 aaKnown RBP7.99□□□□□ -1.13
CCDC38-206ENST00000548771 FAAP100Q0VG06 881 aa7.99□□□□□ -1.13
CCDC38-206ENST00000548771 GRM2Q14416 872 aa7.99□□□□□ -1.13
CCDC38-206ENST00000548771 SHISA5Q8N114 240 aa7.99□□□□□ -1.13
CCDC38-206ENST00000548771 EPS8L3Q8TE67 593 aaKnown RBP7.99□□□□□ -1.13
CCDC38-206ENST00000548771 F13BP05160 661 aa7.98□□□□□ -1.13
CCDC38-206ENST00000548771 ADH5P11766 374 aa7.98□□□□□ -1.13
CCDC38-206ENST00000548771 JAG1P78504 1218 aa7.98□□□□□ -1.13
CCDC38-206ENST00000548771 FBLIM1Q8WUP2 373 aa7.98□□□□□ -1.13
CCDC38-206ENST00000548771 GATA6Q92908 595 aa7.98□□□□□ -1.13
CCDC38-206ENST00000548771 MFSD14AQ96MC6 490 aa7.98□□□□□ -1.13
CCDC38-206ENST00000548771 DCTN4Q9UJW0 460 aa7.98□□□□□ -1.13
CCDC38-206ENST00000548771 WDR64B1ANS9 1081 aa7.97□□□□□ -1.13
CCDC38-206ENST00000548771 OGFOD2Q6N063 350 aa7.97□□□□□ -1.13
CCDC38-206ENST00000548771 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
CCDC38-206ENST00000548771 ZFYVE1Q9HBF4 777 aa7.97□□□□□ -1.13
CCDC38-206ENST00000548771 ACTL7BQ9Y614 415 aa7.97□□□□□ -1.13
CCDC38-206ENST00000548771 FAM95CA0A1B0GW59 222 aa7.96□□□□□ -1.14
CCDC38-206ENST00000548771 TREHO43280 583 aa7.96□□□□□ -1.14
CCDC38-206ENST00000548771 SEZ6L2Q6UXD5 910 aa7.96□□□□□ -1.14
CCDC38-206ENST00000548771 TRAK1Q9UPV9 953 aa7.96□□□□□ -1.14
CCDC38-206ENST00000548771 GADD45BO75293 160 aaPredicted RBP7.95□□□□□ -1.14
CCDC38-206ENST00000548771 ADMP35318 185 aa7.95□□□□□ -1.14
CCDC38-206ENST00000548771 PI16Q6UXB8 463 aa7.95□□□□□ -1.14
CCDC38-206ENST00000548771 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
CCDC38-206ENST00000548771 ACSS3Q9H6R3 686 aa7.95□□□□□ -1.14
CCDC38-206ENST00000548771 PRKAG2Q9UGJ0 569 aa7.95□□□□□ -1.14
CCDC38-206ENST00000548771 AOC2O75106 756 aa7.94□□□□□ -1.14
CCDC38-206ENST00000548771 USP11P51784 963 aa7.94□□□□□ -1.14
CCDC38-206ENST00000548771 AP3B2Q13367 1082 aa7.94□□□□□ -1.14
CCDC38-206ENST00000548771 NFKBIBQ15653 356 aa7.94□□□□□ -1.14
CCDC38-206ENST00000548771 CPSF6Q16630 551 aaKnown RBP eCLIP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms