RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SLFN14P0C7P3 912 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 PFKFB1P16118 471 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 FAM193AP78312 1265 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 KIF23Q02241 960 aaPredicted RBP11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 NBPF14Q5TI25 921 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 TAF3Q5VWG9 929 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 OTUD7BQ6GQQ9 843 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 NBPF10Q6P3W6 841 aaKnown RBP11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 ZNF771Q7L3S4 317 aaPredicted RBP11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 NBPF15Q8N660 670 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 GPHNQ9NQX3 736 aaPredicted RBP11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 CPLX1O14810 134 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 FGAP02671 866 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 H2AFXP16104 143 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 SLC39A14Q15043 492 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 TUBE1Q9UJT0 475 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 AKAP2Q9Y2D5 859 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 V9GYY5 206 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 C4AP0C0L4 1744 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 C4BP0C0L5 1744 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 MYO1BO43795 1136 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 PPP6R2O75170 966 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 ANTXR2P58335 489 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 FANCCQ00597 558 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 TERF2Q15554 542 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 SYT10Q6XYQ8 523 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 APPBP2Q92624 585 aa11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-205ENST00000548573 ADAMTSL3P82987 1691 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 CPDO75976 1380 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 PHLPP2Q6ZVD8 1323 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 FAM237AA0A1B0GTK4 181 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 KIF28PB7ZC32 967 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 CBFA2T2O43439 604 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 HAND2P61296 217 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 TTLL7Q6ZT98 887 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 RALYLQ86SE5 291 aaKnown RBP11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 CREBRFQ8IUR6 639 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 HPSEQ9Y251 543 aa11.43□□□□□ -0.58
SMARCD1-205ENST00000548573 BIN1O00499 593 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 ZNF213O14771 459 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 IGSF3O75054 1194 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 SYKP43405 635 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 ETF1P62495 437 aaKnown RBP11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 WASHC4Q2M389 1173 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 HSD3B7Q9H2F3 369 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 UBR2Q8IWV8 1755 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 ZMYM6O95789 1325 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 BMS1Q14692 1282 aaKnown RBP11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 XAGE2Q96GT9 111 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 TMX1Q9H3N1 280 aa11.42□□□□□ -0.58
SMARCD1-205ENST00000548573 MROH7-TTC4A0A0A0MT08 1334 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 CDKL5O76039 1030 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 MYL5Q02045 173 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 ERCC6LQ2NKX8 1250 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 GORABQ5T7V8 394 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 FCHSD1Q86WN1 690 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 SRRTQ9BXP5 876 aaKnown RBP11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 ZNF446Q9NWS9 450 aa11.41□□□□□ -0.58
SMARCD1-205ENST00000548573 UBASH3AP57075 661 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 PUS7LQ9H0K6 701 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 GJB4Q9NTQ9 266 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 ANGEL1Q9UNK9 670 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 GPAA1O43292 621 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 ATP1A3P13637 1013 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 ADORA1P30542 326 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 TRDNQ13061 729 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 PTPAQ15257 358 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 RESP18Q5W5W9 173 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 CPLX2Q6PUV4 134 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 VPS37DQ86XT2 251 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 ELOA2Q8IYF1 753 aaPredicted RBP11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 ISCA1Q9BUE6 129 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 C19orf44Q9H6X5 657 aa11.4□□□□□ -0.58
SMARCD1-205ENST00000548573 MYH7P12883 1935 aa11.4□□□□□ -0.59
SMARCD1-205ENST00000548573 KCPQ6ZWJ8 1503 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 ERVV-2B6SEH9 535 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 SERPINC1P01008 464 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 ZAP70P43403 619 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 TRIM65Q6PJ69 517 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 VSTM4Q8IW00 320 aa11.39□□□□□ -0.59
SMARCD1-205ENST00000548573 MAP3K14Q99558 947 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms