RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	C11orf91	Q3C1V1	193 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	CCDC144B	Q3MJ40	725 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	FAM26D	Q5JW98	314 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	ALG1L	Q6GMV1	187 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	GDF6	Q6KF10	455 aa	Predicted RBP	5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	ZNF662	Q6ZS27	426 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	NOP9	Q86U38	636 aa	Known RBP	5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	MAP4K3	Q8IVH8	894 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	PMFBP1	Q8TBY8	1022 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	IFT43	Q96FT9	208 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	QTRT2	Q9H974	415 aa	Known RBP	5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	ZFAT	Q9P243	1243 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	DMGDH	Q9UI17	866 aa	Known RBP	5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	LRFN2	Q9ULH4	789 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	POLI	Q9UNA4	740 aa		5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	TMA7	Q9Y2S6	64 aa	Known RBP	5.01	□□□□□ -1.61
CUL3-215	ENST00000546102	GRIN2A	Q12879	1464 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	ARAP1	Q96P48	1450 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	SAMD9	Q5K651	1589 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	GLB1	P16278	677 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	GNA15	P30679	374 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	SSTR4	P31391	388 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	ILDR2	Q71H61	639 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	CMTR1	Q8N1G2	835 aa	Known RBP	5	□□□□□ -1.61
CUL3-215	ENST00000546102	CACTIN-AS1	Q8N1I8	211 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	TMEM130	Q8N3G9	435 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	PLD4	Q96BZ4	506 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	KRTAP4-12	Q9BQ66	201 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	TLR7	Q9NYK1	1049 aa	Known RBP	5	□□□□□ -1.61
CUL3-215	ENST00000546102	BCS1L	Q9Y276	419 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	INPP5F	Q9Y2H2	1132 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	ARHGAP35	Q9NRY4	1499 aa		5	□□□□□ -1.61
CUL3-215	ENST00000546102	LOC102724428	A0A0B4J2F2	783 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	FAM177B	A6PVY3	158 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	DLL1	O00548	723 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	XYLB	O75191	536 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	SIK1	P57059	783 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	ARID5A	Q03989	594 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	DNM1	Q05193	864 aa	Known RBP	4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	ZNF394	Q53GI3	561 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	DZIP1L	Q8IYY4	767 aa	Known RBP	4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	GJD3	Q8N144	294 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	IL22RA1	Q8N6P7	574 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	EDEM1	Q92611	657 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	MUC3B	Q9H195	1237 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102	PCDHGB7	Q9Y5F8	929 aa		4.99	□□□□□ -1.61
CUL3-215	ENST00000546102		F8W735	103 aa	Predicted RBP	4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	COBL	O75128	1261 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	DEAF1	O75398	565 aa	Predicted RBP	4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	ALX3	O95076	343 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	CTSH	P09668	335 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	BRD2	P25440	801 aa	Known RBP	4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	GRIK1	P39086	918 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	ARMC5	Q96C12	935 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	MYO19	Q96H55	970 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	CRELD1	Q96HD1	420 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	CSRNP1	Q96S65	589 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	GML	Q99445	158 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	PIF1	Q9H611	641 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	RAX	Q9Y2V3	346 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	RTCB	Q9Y3I0	505 aa	Known RBP	4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	FYCO1	Q9BQS8	1478 aa		4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	COL17A1	Q9UMD9	1497 aa	Predicted RBP	4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	PCF11	O94913	1555 aa	Known RBP	4.98	□□□□□ -1.61
CUL3-215	ENST00000546102	FMN1	Q68DA7	1419 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	KIAA0586	Q9BVV6	1533 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	UGGT2	Q9NYU1	1516 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	CFAP43	Q8NDM7	1665 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	CEP170	Q5SW79	1584 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	TLDC2	A0PJX2	215 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102		J3QW42	95 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	DHX15	O43143	795 aa	Known RBP	4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	EGFR	P00533	1210 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	IGLV1-40	P01703	118 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	PDGFA	P04085	211 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	MZF1	P28698	734 aa	Predicted RBP	4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	USP5	P45974	858 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	RACK1	P63244	317 aa	Known RBP	4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	ORC1	Q13415	861 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	USP48	Q86UV5	1035 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	ETFBKMT	Q8IXQ9	262 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	ZNF654	Q8IZM8	581 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	SPACA7	Q96KW9	195 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	NSUN5	Q96P11	429 aa	Known RBP	4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	CEP41	Q9BYV8	373 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	ZSWIM4	Q9H7M6	989 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	STOML1	Q9UBI4	398 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	DDX41	Q9UJV9	622 aa	Known RBP	4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	AK5	Q9Y6K8	562 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	KIAA0556	O60303	1618 aa		4.97	□□□□□ -1.61
CUL3-215	ENST00000546102	YBX3	P16989	372 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	GRN	P28799	593 aa	Known RBP	4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	SOX18	P35713	384 aa		4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	ZAP70	P43403	619 aa		4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	SDE2	Q6IQ49	451 aa		4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	FAM117B	Q6P1L5	589 aa		4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	TREML1	Q86YW5	311 aa		4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	FBF1	Q8TES7	1133 aa		4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	FAM13B	Q9NYF5	915 aa		4.96	□□□□□ -1.62
CUL3-215	ENST00000546102	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.96	□□□□□ -1.62

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