RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ITGA6P23229 1130 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 CTSWP56202 376 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 TRDNQ13061 729 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 STK38Q15208 465 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 SF3A1Q15459 793 aaKnown RBP15.72■□□□□ 0.11
PPME1-208ENST00000543525 ADALQ6DHV7 355 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 TTLL11Q8NHH1 800 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 KCNG4Q8TDN1 519 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 PCDHA7Q9UN72 937 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 BECN2A8MW95 431 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 YEATS4O95619 227 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 ADD2P35612 726 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 ANTXR2P58335 489 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 C11orf57Q6ZUT1 292 aaPredicted RBP15.72■□□□□ 0.11
PPME1-208ENST00000543525 NAT10Q9H0A0 1025 aaKnown RBP15.72■□□□□ 0.11
PPME1-208ENST00000543525 HPS5Q9UPZ3 1129 aa15.72■□□□□ 0.11
PPME1-208ENST00000543525 PPFIA3O75145 1194 aa15.71■□□□□ 0.11
PPME1-208ENST00000543525 MCAMP43121 646 aa15.71■□□□□ 0.11
PPME1-208ENST00000543525 FBXO18Q8NFZ0 1043 aa15.71■□□□□ 0.11
PPME1-208ENST00000543525 MRFAP1L1Q96HT8 127 aa15.71■□□□□ 0.11
PPME1-208ENST00000543525 MYH7P12883 1935 aa15.71■□□□□ 0.1
PPME1-208ENST00000543525 GPTP24298 496 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 HLFQ16534 295 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 CEP57L1Q8IYX8 460 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 FMR1NBQ8N0W7 255 aaPredicted RBP15.7■□□□□ 0.1
PPME1-208ENST00000543525 LINC00301Q8NCQ3 95 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 GREM2Q9H772 168 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 NRBP1Q9UHY1 535 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
PPME1-208ENST00000543525 NEMFO60524 1076 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 UQCRFS1P1P0C7P4 283 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 UBE3CQ15386 1083 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 PI16Q6UXB8 463 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 SYNE3Q6ZMZ3 975 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 SDF4Q9BRK5 362 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 TBC1D2BQ9UPU7 963 aa15.7■□□□□ 0.1
PPME1-208ENST00000543525 PDE8AO60658 829 aa15.69■□□□□ 0.1
PPME1-208ENST00000543525 SLC9C2Q5TAH2 1124 aa15.69■□□□□ 0.1
PPME1-208ENST00000543525 MYSM1Q5VVJ2 828 aa15.69■□□□□ 0.1
PPME1-208ENST00000543525 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
PPME1-208ENST00000543525 SYNE4Q8N205 404 aa15.69■□□□□ 0.1
PPME1-208ENST00000543525 TRMT112Q9UI30 125 aaKnown RBP15.69■□□□□ 0.1
PPME1-208ENST00000543525 ZMYM6O95789 1325 aa15.69■□□□□ 0.1
PPME1-208ENST00000543525 SPTLC2O15270 562 aa15.68■□□□□ 0.1
PPME1-208ENST00000543525 CDKL5O76039 1030 aa15.68■□□□□ 0.1
PPME1-208ENST00000543525 CYP19A1P11511 503 aaPredicted RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 ZRSR1Q15695 479 aaKnown RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 VGLL2Q8N8G2 317 aa15.68■□□□□ 0.1
PPME1-208ENST00000543525 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 CLIC4Q9Y696 253 aa15.68■□□□□ 0.1
PPME1-208ENST00000543525 DDX60Q8IY21 1712 aaKnown RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 PDE8BO95263 885 aa15.68■□□□□ 0.1
PPME1-208ENST00000543525 POLR3DP05423 398 aaPredicted RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 LRMPQ12912 555 aa15.68■□□□□ 0.1
PPME1-208ENST00000543525 CPLX2Q6PUV4 134 aaKnown RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 DHX40Q8IX18 779 aaKnown RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 PIH1D3Q9NQM4 214 aaKnown RBP15.68■□□□□ 0.1
PPME1-208ENST00000543525 LRP5O75197 1615 aa15.67■□□□□ 0.1
PPME1-208ENST00000543525 ERVV-1B6SEH8 477 aa15.67■□□□□ 0.1
PPME1-208ENST00000543525 IDH1O75874 414 aaKnown RBP15.67■□□□□ 0.1
PPME1-208ENST00000543525 APPP05067 770 aa15.67■□□□□ 0.1
PPME1-208ENST00000543525 ARID4AP29374 1257 aaPredicted RBP15.67■□□□□ 0.1
PPME1-208ENST00000543525 BCL9LQ86UU0 1499 aa15.67■□□□□ 0.1
PPME1-208ENST00000543525 ANKRD36CQ5JPF3 1778 aa15.67■□□□□ 0.1
PPME1-208ENST00000543525 A0A1B0GVL5 298 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 SH2B2O14492 632 aaPredicted RBP15.66■□□□□ 0.1
PPME1-208ENST00000543525 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.1
PPME1-208ENST00000543525 NDUFA8P51970 172 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 KIF23Q02241 960 aaPredicted RBP15.66■□□□□ 0.1
PPME1-208ENST00000543525 ANO1Q5XXA6 986 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 TMEM87BQ96K49 555 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 GJD4Q96KN9 370 aaPredicted RBP15.66■□□□□ 0.1
PPME1-208ENST00000543525 MROH5Q6ZUA9 1318 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 ZNF532Q9HCE3 1301 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 PDE6AP16499 860 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 PUM3Q15397 648 aaKnown RBP15.66■□□□□ 0.1
PPME1-208ENST00000543525 ALX1Q15699 326 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 CCDC144BQ3MJ40 725 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 CCDC102BQ68D86 513 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 RAB11FIP4Q86YS3 637 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 TBC1D10CQ8IV04 446 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 CCDC144CPQ8IYA2 1237 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 CACTINQ8WUQ7 758 aaKnown RBP15.66■□□□□ 0.1
PPME1-208ENST00000543525 LPIN2Q92539 896 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 AK7Q96M32 723 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 BPIFA3Q9BQP9 254 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 NBPF3Q9H094 633 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 KIAA1468Q9P260 1216 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 BCL9O00512 1426 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 AKAP11Q9UKA4 1901 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 C4AP0C0L4 1744 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 C4BP0C0L5 1744 aa15.66■□□□□ 0.1
PPME1-208ENST00000543525 ITGB4P16144 1822 aa15.65■□□□□ 0.1
PPME1-208ENST00000543525 COL22A1Q8NFW1 1626 aaPredicted RBP15.65■□□□□ 0.1
PPME1-208ENST00000543525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.65■□□□□ 0.1
PPME1-208ENST00000543525 RIOK3O14730 519 aaKnown RBP15.65■□□□□ 0.1
PPME1-208ENST00000543525 CYB5R4Q7L1T6 521 aa15.65■□□□□ 0.1
PPME1-208ENST00000543525 ALG1Q9BT22 464 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms