RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 E7EWF7 191 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 FOXP2O15409 715 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 UFL1O94874 794 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 DPEP1P16444 411 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 CYP7A1P22680 504 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 TGFB2P61812 414 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 CUL4AQ13619 759 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 GPR162Q16538 588 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 IMMTQ16891 758 aaKnown RBP11.35□□□□□ -0.59
PAAF1-209ENST00000540659 TSGA10IPQ3SY00 556 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 Q6ZUG5 572 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 CCDC83Q8IWF9 413 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 BRIP1Q9BX63 1249 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 LRRC2Q9BYS8 371 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 CWC22Q9HCG8 908 aaKnown RBP11.35□□□□□ -0.59
PAAF1-209ENST00000540659 CTNNA3Q9UI47 895 aa11.35□□□□□ -0.59
PAAF1-209ENST00000540659 ZNF213O14771 459 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 FGAP02671 866 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 ATP2B4P23634 1241 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 CHRNA5P30532 468 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 ALDH1B1P30837 517 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 FGD1P98174 961 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 STK3Q13188 491 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 TMED8Q6PL24 325 aaPredicted RBP11.34□□□□□ -0.59
PAAF1-209ENST00000540659 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 TNPO1Q92973 898 aaKnown RBP11.34□□□□□ -0.59
PAAF1-209ENST00000540659 ZSCAN31Q96LW9 406 aaPredicted RBP11.34□□□□□ -0.59
PAAF1-209ENST00000540659 CRAMP1Q96RY5 1269 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 LTBP1Q14766 1721 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 IRS2Q9Y4H2 1338 aa11.34□□□□□ -0.59
PAAF1-209ENST00000540659 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 SEMA3EO15041 775 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 DTNBO60941 627 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 BBOX1O75936 387 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 KCNA3P22001 575 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 HOXA10P31260 410 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-209ENST00000540659 PKP1Q13835 747 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 TOB2Q14106 344 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-209ENST00000540659 ANKRD1Q15327 319 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 ME3Q16798 604 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 FOXD4L5Q5VV16 416 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-209ENST00000540659 NAA16Q6N069 864 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-209ENST00000540659 CHST3Q7LGC8 479 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 ZNF804AQ7Z570 1209 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 ADGRA1Q86SQ6 560 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 NECAB1Q8N987 351 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 FOXD4L4Q8WXT5 416 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-209ENST00000540659 ZNF622Q969S3 477 aaKnown RBP eCLIP11.33□□□□□ -0.6
PAAF1-209ENST00000540659 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
PAAF1-209ENST00000540659 TPCN1Q9ULQ1 816 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 SLC4A4Q9Y6R1 1079 aa11.33□□□□□ -0.6
PAAF1-209ENST00000540659 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
PAAF1-209ENST00000540659 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
PAAF1-209ENST00000540659 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 PRKAB2O43741 272 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 SRGNP10124 158 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 NPR1P16066 1061 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 DYNLL1P63167 89 aaKnown RBP11.32□□□□□ -0.6
PAAF1-209ENST00000540659 NUCB2P80303 420 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 C2CD5Q86YS7 1000 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
PAAF1-209ENST00000540659 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
PAAF1-209ENST00000540659 LAMB1P07942 1786 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 PRDX5P30044 214 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 TDO2P48775 406 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 MECOMQ03112 1051 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 CTDSPL2Q05D32 466 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 DHX32Q7L7V1 743 aaKnown RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 STK11IPQ8N1F8 1099 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 TBC1D16Q8TBP0 767 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 BRF1Q92994 677 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 MASTLQ96GX5 879 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 NAPBQ9H115 298 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 ALDH8A1Q9H2A2 487 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 EPB41L4AQ9HCS5 686 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 ZNF219Q9P2Y4 722 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 POLLQ9UGP5 575 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
PAAF1-209ENST00000540659 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
PAAF1-209ENST00000540659 GNAT2P19087 354 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 GJB2P29033 226 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 MCM4P33991 863 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 APOBRQ0VD83 1088 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 ST3GAL1Q11201 340 aa11.3□□□□□ -0.6
PAAF1-209ENST00000540659 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
PAAF1-209ENST00000540659 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms