RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 ABCB6Q9NP58 842 aa8.27□□□□□ -1.09
SRGAP1-203ENST00000537585 EIF1AYO14602 144 aaKnown RBP8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 GSC2O15499 205 aa8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 NDUFB5O43674 189 aa8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 F13BP05160 661 aa8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 ADMP35318 185 aa8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 B4GALNT3Q6L9W6 998 aa8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 FBXL6Q8N531 539 aa8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 EHD4Q9H223 541 aa8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 OAS3Q9Y6K5 1087 aaKnown RBP8.26□□□□□ -1.09
SRGAP1-203ENST00000537585 COBLO75128 1261 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 CPNE3O75131 537 aaKnown RBP8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 ADH5P11766 374 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 RXRBP28702 533 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 FAAP100Q0VG06 881 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 SLC51AQ86UW1 340 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 GLIS3Q8NEA6 775 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 EPS8L3Q8TE67 593 aaKnown RBP8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 CCDC74AQ96AQ1 378 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 HIF3AQ9Y2N7 669 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 ACTL7BQ9Y614 415 aa8.25□□□□□ -1.09
SRGAP1-203ENST00000537585 B3GALT4O96024 378 aa8.24□□□□□ -1.09
SRGAP1-203ENST00000537585 ZNF157P51786 506 aaPredicted RBP8.24□□□□□ -1.09
SRGAP1-203ENST00000537585 SOX4Q06945 474 aaPredicted RBP8.24□□□□□ -1.09
SRGAP1-203ENST00000537585 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
SRGAP1-203ENST00000537585 SOWAHDA6NJG2 315 aa8.23□□□□□ -1.09
SRGAP1-203ENST00000537585 ITPKAP23677 461 aa8.23□□□□□ -1.09
SRGAP1-203ENST00000537585 GRM2Q14416 872 aa8.23□□□□□ -1.09
SRGAP1-203ENST00000537585 TMC1Q8TDI8 760 aa8.23□□□□□ -1.09
SRGAP1-203ENST00000537585 CYP4F12Q9HCS2 524 aa8.23□□□□□ -1.09
SRGAP1-203ENST00000537585 FAM105AQ9NUU6 356 aa8.23□□□□□ -1.09
SRGAP1-203ENST00000537585 POU4F3Q15319 338 aa8.22□□□□□ -1.09
SRGAP1-203ENST00000537585 WDR89Q96FK6 387 aaPredicted RBP8.22□□□□□ -1.09
SRGAP1-203ENST00000537585 FAM95CA0A1B0GW59 222 aa8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 DYNC1LI2O43237 492 aaPredicted RBP8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 RAB6AP20340 208 aa8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 GP2P55259 537 aaKnown RBP8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 NFKBIBQ15653 356 aa8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 AKAP4Q5JQC9 854 aa8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 DTX1Q86Y01 620 aa8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 GATA6Q92908 595 aa8.21□□□□□ -1.1
SRGAP1-203ENST00000537585 FAM170BA6NMN3 283 aa8.2□□□□□ -1.1
SRGAP1-203ENST00000537585 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
SRGAP1-203ENST00000537585 NFXL1Q6ZNB6 911 aa8.2□□□□□ -1.1
SRGAP1-203ENST00000537585 CSRNP1Q96S65 589 aa8.2□□□□□ -1.1
SRGAP1-203ENST00000537585 KRTAP4-12Q9BQ66 201 aa8.2□□□□□ -1.1
SRGAP1-203ENST00000537585 ZC3H12CQ9C0D7 883 aaKnown RBP8.2□□□□□ -1.1
SRGAP1-203ENST00000537585 PRKAG2Q9UGJ0 569 aa8.2□□□□□ -1.1
SRGAP1-203ENST00000537585 GADD45BO75293 160 aaPredicted RBP8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 NFICP08651 508 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 USP11P51784 963 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 MCTP1Q6DN14 999 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 EZH1Q92800 747 aaPredicted RBP8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 WDR18Q9BV38 432 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 LGR6Q9HBX8 967 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 PPP1R9AQ9ULJ8 1098 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 AP4E1Q9UPM8 1137 aa8.19□□□□□ -1.1
SRGAP1-203ENST00000537585 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
SRGAP1-203ENST00000537585 MSMPQ1L6U9 139 aa8.18□□□□□ -1.1
SRGAP1-203ENST00000537585 DYMQ7RTS9 669 aa8.18□□□□□ -1.1
SRGAP1-203ENST00000537585 STK35Q8TDR2 534 aa8.18□□□□□ -1.1
SRGAP1-203ENST00000537585 SEMA6CQ9H3T2 930 aa8.18□□□□□ -1.1
SRGAP1-203ENST00000537585 CCDC86Q9H6F5 360 aaKnown RBP8.18□□□□□ -1.1
SRGAP1-203ENST00000537585 PIM2Q9P1W9 311 aa8.18□□□□□ -1.1
SRGAP1-203ENST00000537585 CYP11A1P05108 521 aa8.17□□□□□ -1.1
SRGAP1-203ENST00000537585 CORO1BQ9BR76 489 aa8.17□□□□□ -1.1
SRGAP1-203ENST00000537585 AOC2O75106 756 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 LIG1P18858 919 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 PDE3AQ14432 1141 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 PAOXQ6QHF9 649 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 ZAR1Q86SH2 424 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 ALKBH8Q96BT7 664 aaKnown RBP8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 TBC1D32Q96NH3 1257 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 CITED4Q96RK1 184 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 DNAJC25Q9H1X3 360 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 ACSS3Q9H6R3 686 aa8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 BIN2Q9UBW5 565 aaPredicted RBP8.16□□□□□ -1.1
SRGAP1-203ENST00000537585 ZNF862O60290 1169 aa8.15□□□□□ -1.1
SRGAP1-203ENST00000537585 GRIK1P39086 918 aa8.15□□□□□ -1.1
SRGAP1-203ENST00000537585 FCGRTP55899 365 aa8.15□□□□□ -1.1
SRGAP1-203ENST00000537585 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.1
SRGAP1-203ENST00000537585 OSBPL1AQ9BXW6 950 aa8.15□□□□□ -1.1
SRGAP1-203ENST00000537585 NEFLP07196 543 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 FOSL1P15407 271 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 DSC3Q14574 896 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 SEZ6L2Q6UXD5 910 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 ZNF765Q7L2R6 523 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 GSX1Q9H4S2 264 aaPredicted RBP8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 C1GALT1Q9NS00 363 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 RAD18Q9NS91 495 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 ATG3Q9NT62 314 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
SRGAP1-203ENST00000537585 TMPRSS2O15393 492 aa8.13□□□□□ -1.11
SRGAP1-203ENST00000537585 ASPAP45381 313 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms