RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 SLC27A2O14975 620 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 C21orf2O43822 256 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 BLOC1S2Q6QNY1 142 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 HSPD1P10809 573 aaKnown RBP11.35□□□□□ -0.59
RTL1-201ENST00000534062 PRDX5P30044 214 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 ADCK5Q3MIX3 580 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 TBC1D16Q8TBP0 767 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 NOL10Q9BSC4 688 aaKnown RBP11.35□□□□□ -0.59
RTL1-201ENST00000534062 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 COL4A1P02462 1669 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 GAS2L3Q86XJ1 694 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 LRRC2Q9BYS8 371 aa11.35□□□□□ -0.59
RTL1-201ENST00000534062 ISY1Q9ULR0 285 aaKnown RBP11.35□□□□□ -0.59
RTL1-201ENST00000534062 PSMA5P28066 241 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 GTF2IP78347 998 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 RRP12Q5JTH9 1297 aaKnown RBP11.34□□□□□ -0.59
RTL1-201ENST00000534062 ZNF830Q96NB3 372 aaPredicted RBP11.34□□□□□ -0.59
RTL1-201ENST00000534062 NAPBQ9H115 298 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 SLC4A4Q9Y6R1 1079 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 HOXA10P31260 410 aaPredicted RBP11.34□□□□□ -0.59
RTL1-201ENST00000534062 IMMTQ16891 758 aaKnown RBP11.34□□□□□ -0.59
RTL1-201ENST00000534062 SP8Q8IXZ3 490 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 DBNDD1Q9H9R9 158 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 PDRG1Q9NUG6 133 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 MINDY4BA8MYZ0 360 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
RTL1-201ENST00000534062 ANAPC15P60006 121 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 FBXO33Q7Z6M2 555 aa11.34□□□□□ -0.59
RTL1-201ENST00000534062 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
RTL1-201ENST00000534062 DTNBO60941 627 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 CHST3Q7LGC8 479 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
RTL1-201ENST00000534062 PLCD3Q8N3E9 789 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 ZNF512BQ96KM6 892 aaPredicted RBP11.33□□□□□ -0.6
RTL1-201ENST00000534062 AATFQ9NY61 560 aaKnown RBP eCLIP11.33□□□□□ -0.6
RTL1-201ENST00000534062 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
RTL1-201ENST00000534062 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 ZNF213O14771 459 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 FOXD4L5Q5VV16 416 aaPredicted RBP11.33□□□□□ -0.6
RTL1-201ENST00000534062 FOXD4L4Q8WXT5 416 aaPredicted RBP11.33□□□□□ -0.6
RTL1-201ENST00000534062 CD209Q9NNX6 404 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 TRDNQ13061 729 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 STK3Q13188 491 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 MFSD14BQ5SR56 506 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 NACAP1Q9BZK3 213 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
RTL1-201ENST00000534062 TNS1Q9HBL0 1735 aaKnown RBP11.33□□□□□ -0.6
RTL1-201ENST00000534062 MED23Q9ULK4 1368 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 GOLGA6L4A6NEF3 574 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 PRKAB2O43741 272 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 UBE3CQ15386 1083 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 TERF1P54274 439 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 DYNLL1P63167 89 aaKnown RBP11.32□□□□□ -0.6
RTL1-201ENST00000534062 NECTIN1Q15223 517 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
RTL1-201ENST00000534062 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 FGAP02671 866 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 CYP21A2P08686 494 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 DPEP1P16444 411 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 LCORLQ8N3X6 602 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
RTL1-201ENST00000534062 NEK1Q96PY6 1258 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 EYA3Q99504 573 aa11.32□□□□□ -0.6
RTL1-201ENST00000534062 RBM5P52756 815 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTL1-201ENST00000534062 MECOMQ03112 1051 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 TTLL6Q8N841 843 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 UQCRHLA0A096LP55 91 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 UQCRHP07919 91 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.31□□□□□ -0.6
RTL1-201ENST00000534062 KRT32Q14532 448 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 ZRSR1Q15695 479 aaKnown RBP11.31□□□□□ -0.6
RTL1-201ENST00000534062 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
RTL1-201ENST00000534062 DSCC1Q9BVC3 393 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 SEMA3EO15041 775 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 AK2P54819 239 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 ZSCAN30Q86W11 494 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 SNX21Q969T3 373 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 GBP4Q96PP9 640 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
RTL1-201ENST00000534062 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
RTL1-201ENST00000534062 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
RTL1-201ENST00000534062 USP5P45974 858 aa11.3□□□□□ -0.6
RTL1-201ENST00000534062 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
RTL1-201ENST00000534062 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
RTL1-201ENST00000534062 AOC3Q16853 763 aa11.3□□□□□ -0.6
RTL1-201ENST00000534062 MTFR1LQ9H019 292 aa11.3□□□□□ -0.6
RTL1-201ENST00000534062 STYK1Q6J9G0 422 aa11.29□□□□□ -0.6
RTL1-201ENST00000534062 MXD3Q9BW11 206 aa11.29□□□□□ -0.6
RTL1-201ENST00000534062 LAMB2P55268 1798 aa11.29□□□□□ -0.6
RTL1-201ENST00000534062 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
RTL1-201ENST00000534062 SCNN1DP51172 638 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms