RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SCN11AQ9UI33 1791 aa22.41■■□□□ 1.18
CAPN1-226ENST00000533820 ATP1A3P13637 1013 aa22.41■■□□□ 1.18
CAPN1-226ENST00000533820 INCENPQ9NQS7 918 aa22.41■■□□□ 1.18
CAPN1-226ENST00000533820 GOLGA8FQ08AF8 430 aa22.41■■□□□ 1.18
CAPN1-226ENST00000533820 GOLGA8DPQ0D2H9 430 aa22.41■■□□□ 1.18
CAPN1-226ENST00000533820 GNL2Q13823 731 aaKnown RBP22.41■■□□□ 1.18
CAPN1-226ENST00000533820 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
CAPN1-226ENST00000533820 MYL10Q9BUA6 226 aa22.41■■□□□ 1.18
CAPN1-226ENST00000533820 UBE2Q2LH0YL09 131 aa22.4■■□□□ 1.18
CAPN1-226ENST00000533820 ZNF213O14771 459 aa22.4■■□□□ 1.18
CAPN1-226ENST00000533820 GPTP24298 496 aa22.4■■□□□ 1.18
CAPN1-226ENST00000533820 NYAP1Q6ZVC0 841 aa22.4■■□□□ 1.18
CAPN1-226ENST00000533820 GPAA1O43292 621 aa22.4■■□□□ 1.18
CAPN1-226ENST00000533820 PFKFB1P16118 471 aa22.4■■□□□ 1.18
CAPN1-226ENST00000533820 SENP2Q9HC62 589 aa22.4■■□□□ 1.18
CAPN1-226ENST00000533820 NEMFO60524 1076 aa22.39■■□□□ 1.18
CAPN1-226ENST00000533820 WDHD1O75717 1129 aaPredicted RBP22.39■■□□□ 1.18
CAPN1-226ENST00000533820 ARMCX5Q6P1M9 558 aa22.39■■□□□ 1.18
CAPN1-226ENST00000533820 MICU3Q86XE3 530 aa22.39■■□□□ 1.18
CAPN1-226ENST00000533820 SYT10Q6XYQ8 523 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 CCDC191Q8NCU4 936 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 KCNG4Q8TDN1 519 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 ANO1Q5XXA6 986 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 ATL3Q6DD88 541 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 NCOA7Q8NI08 942 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 KIF18AQ8NI77 898 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 ARFGEF2Q9Y6D5 1785 aa22.39■■□□□ 1.17
CAPN1-226ENST00000533820 MROH7-TTC4A0A0A0MT08 1334 aa22.38■■□□□ 1.17
CAPN1-226ENST00000533820 IDH1O75874 414 aaKnown RBP22.38■■□□□ 1.17
CAPN1-226ENST00000533820 GPR108Q9NPR9 543 aa22.38■■□□□ 1.17
CAPN1-226ENST00000533820 KMT5BQ4FZB7 885 aa22.38■■□□□ 1.17
CAPN1-226ENST00000533820 SPECC1Q5M775 1068 aa22.38■■□□□ 1.17
CAPN1-226ENST00000533820 E4F1Q66K89 784 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-226ENST00000533820 MB21D2Q8IYB1 491 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-226ENST00000533820 LRRN4CLQ8ND94 238 aa22.38■■□□□ 1.17
CAPN1-226ENST00000533820 CLIC6Q96NY7 704 aa22.38■■□□□ 1.17
CAPN1-226ENST00000533820 SFPQP23246 707 aaKnown RBP eCLIP22.37■■□□□ 1.17
CAPN1-226ENST00000533820 DHX16O60231 1041 aaKnown RBP22.37■■□□□ 1.17
CAPN1-226ENST00000533820 CCDC66A2RUB6 948 aa22.37■■□□□ 1.17
CAPN1-226ENST00000533820 KIF23Q02241 960 aaPredicted RBP22.37■■□□□ 1.17
CAPN1-226ENST00000533820 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
CAPN1-226ENST00000533820 ZCRB1Q8TBF4 217 aaKnown RBP22.37■■□□□ 1.17
CAPN1-226ENST00000533820 ALG1Q9BT22 464 aa22.37■■□□□ 1.17
CAPN1-226ENST00000533820 A0A1W2PQ27 194 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 A0A1W2PQ64 194 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 A0A1W2PQD8 194 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 SLFN14P0C7P3 912 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 OGFRQ9NZT2 677 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 KAT6BQ8WYB5 2073 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 PNOCQ13519 176 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 METTL24Q5JXM2 366 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 SLC9C2Q5TAH2 1124 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 CCDC82Q8N4S0 544 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 NEDD4P46934 1319 aa22.36■■□□□ 1.17
CAPN1-226ENST00000533820 B4E1Z4 1266 aa22.35■■□□□ 1.17
CAPN1-226ENST00000533820 TRDNQ13061 729 aa22.35■■□□□ 1.17
CAPN1-226ENST00000533820 FAM177A1Q8N128 213 aaPredicted RBP22.35■■□□□ 1.17
CAPN1-226ENST00000533820 APPBP2Q92624 585 aa22.35■■□□□ 1.17
CAPN1-226ENST00000533820 POLR3EQ9NVU0 708 aa22.35■■□□□ 1.17
CAPN1-226ENST00000533820 AXDND1Q5T1B0 1012 aaPredicted RBP22.35■■□□□ 1.17
CAPN1-226ENST00000533820 FBXO38Q6PIJ6 1188 aa22.35■■□□□ 1.17
CAPN1-226ENST00000533820 STRN4Q9NRL3 753 aa22.35■■□□□ 1.17
CAPN1-226ENST00000533820 GSDMDP57764 484 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 IFIT5Q13325 482 aaKnown RBP22.34■■□□□ 1.17
CAPN1-226ENST00000533820 CYB5R4Q7L1T6 521 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 DPF2Q92785 391 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 FEZ1Q99689 392 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 YEATS4O95619 227 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 SYKP43405 635 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 TBC1D10CQ8IV04 446 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 PPP1R13BQ96KQ4 1090 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 PRDM11Q9NQV5 511 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 MCAMP43121 646 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 FANCCQ00597 558 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 ERCC6LQ2NKX8 1250 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 NFXL1Q6ZNB6 911 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 VPS37DQ86XT2 251 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 HELBQ8NG08 1087 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-226ENST00000533820 TMX1Q9H3N1 280 aa22.34■■□□□ 1.17
CAPN1-226ENST00000533820 ADAMTS7Q9UKP4 1686 aa22.33■■□□□ 1.17
CAPN1-226ENST00000533820 SERPINC1P01008 464 aa22.33■■□□□ 1.17
CAPN1-226ENST00000533820 METAP2P50579 478 aaKnown RBP eCLIP22.33■■□□□ 1.173e-8■■■■□ 23.9
CAPN1-226ENST00000533820 NLRP12P59046 1061 aa22.33■■□□□ 1.17
CAPN1-226ENST00000533820 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.17
CAPN1-226ENST00000533820 NCAPHQ15003 741 aa22.33■■□□□ 1.16
CAPN1-226ENST00000533820 RNF216Q9NWF9 866 aaPredicted RBP22.33■■□□□ 1.16
CAPN1-226ENST00000533820 AKAP2Q9Y2D5 859 aa22.33■■□□□ 1.16
CAPN1-226ENST00000533820 CIAO1O76071 339 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 CDC27P30260 824 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 KRT40Q6A162 431 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 ST7Q9NRC1 585 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 DDX41Q9UJV9 622 aaKnown RBP22.32■■□□□ 1.16
CAPN1-226ENST00000533820 SLU7O95391 586 aaKnown RBP22.32■■□□□ 1.16
CAPN1-226ENST00000533820 ATP2B1P20020 1258 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 TPM4P67936 248 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 CFAP100Q494V2 611 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 BRAPQ7Z569 592 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 NBPF3Q9H094 633 aa22.32■■□□□ 1.16
CAPN1-226ENST00000533820 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-226ENST00000533820 LRRFIP1Q32MZ4 808 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms