RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 C7orf43Q8WVR3 580 aa7.5□□□□□ -1.21
C11orf54-212ENST00000533154 CAPN10Q9HC96 672 aa7.5□□□□□ -1.21
C11orf54-212ENST00000533154 ABCA8O94911 1581 aa7.5□□□□□ -1.21
C11orf54-212ENST00000533154 CTTNBP2Q8WZ74 1663 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 OPLAHO14841 1288 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 TBC1D8BQ0IIM8 1120 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 SNX29Q8TEQ0 813 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 ACBD3Q9H3P7 528 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 C12orf49Q9H741 205 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 PRKAG2Q9UGJ0 569 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 DMGDHQ9UI17 866 aaKnown RBP7.49□□□□□ -1.21
C11orf54-212ENST00000533154 CD109Q6YHK3 1445 aa7.49□□□□□ -1.21
C11orf54-212ENST00000533154 MAGI3Q5TCQ9 1506 aa7.48□□□□□ -1.21
C11orf54-212ENST00000533154 SPEM2Q0P670 501 aa7.48□□□□□ -1.21
C11orf54-212ENST00000533154 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
C11orf54-212ENST00000533154 ZNF654Q8IZM8 581 aa7.48□□□□□ -1.21
C11orf54-212ENST00000533154 SRCIN1Q9C0H9 1055 aa7.48□□□□□ -1.21
C11orf54-212ENST00000533154 JPH1Q9HDC5 661 aaPredicted RBP7.48□□□□□ -1.21
C11orf54-212ENST00000533154 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
C11orf54-212ENST00000533154 A6NHS1 94 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 TNFRSF21O75509 655 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 ATP2B1P20020 1258 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 IREB2P48200 963 aaKnown RBP7.47□□□□□ -1.21
C11orf54-212ENST00000533154 IDH3AP50213 366 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 ST13P50502 369 aaKnown RBP7.47□□□□□ -1.21
C11orf54-212ENST00000533154 ARSDP51689 593 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 HS2ST1Q7LGA3 356 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 NUDT8Q8WV74 236 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 SUSD3Q96L08 255 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 NEUROD4Q9HD90 331 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 FNDC3AQ9Y2H6 1198 aaKnown RBP7.47□□□□□ -1.21
C11orf54-212ENST00000533154 CFAP43Q8NDM7 1665 aa7.47□□□□□ -1.21
C11orf54-212ENST00000533154 USP31Q70CQ4 1352 aa7.46□□□□□ -1.21
C11orf54-212ENST00000533154 SMARCA5O60264 1052 aaPredicted RBP7.46□□□□□ -1.22
C11orf54-212ENST00000533154 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.46□□□□□ -1.22
C11orf54-212ENST00000533154 DPH6Q7L8W6 267 aa7.46□□□□□ -1.22
C11orf54-212ENST00000533154 DMRTC2Q8IXT2 367 aaPredicted RBP7.46□□□□□ -1.22
C11orf54-212ENST00000533154 FMR1NBQ8N0W7 255 aaPredicted RBP7.46□□□□□ -1.22
C11orf54-212ENST00000533154 WFDC12Q8WWY7 111 aa7.46□□□□□ -1.22
C11orf54-212ENST00000533154 CCDC74AQ96AQ1 378 aa7.46□□□□□ -1.22
C11orf54-212ENST00000533154 ANKIB1Q9P2G1 1089 aa7.46□□□□□ -1.22
C11orf54-212ENST00000533154 FAM8A1Q9UBU6 413 aa7.46□□□□□ -1.22
C11orf54-212ENST00000533154 OAS3Q9Y6K5 1087 aaKnown RBP7.46□□□□□ -1.22
C11orf54-212ENST00000533154 GOLGA3Q08378 1498 aa7.46□□□□□ -1.22
C11orf54-212ENST00000533154 PRXQ9BXM0 1461 aa7.46□□□□□ -1.22
C11orf54-212ENST00000533154 INPP5BP32019 993 aa7.45□□□□□ -1.22
C11orf54-212ENST00000533154 PRR23CQ6ZRP0 262 aa7.45□□□□□ -1.22
C11orf54-212ENST00000533154 USP48Q86UV5 1035 aa7.45□□□□□ -1.22
C11orf54-212ENST00000533154 KRTAP4-2Q9BYR5 136 aa7.45□□□□□ -1.22
C11orf54-212ENST00000533154 KIF21BO75037 1637 aa7.45□□□□□ -1.22
C11orf54-212ENST00000533154 ATP10BO94823 1461 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 TNNI2P48788 182 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 RACK1P63244 317 aaKnown RBP7.44□□□□□ -1.22
C11orf54-212ENST00000533154 ARID5AQ03989 594 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 TRIP4Q15650 581 aaPredicted RBP7.44□□□□□ -1.22
C11orf54-212ENST00000533154 ZNF438Q7Z4V0 828 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 NOP9Q86U38 636 aaKnown RBP7.44□□□□□ -1.22
C11orf54-212ENST00000533154 OSBPL7Q9BZF2 842 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 IGFLR1Q9H665 355 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 ZFYVE28Q9HCC9 887 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 SRA1Q9HD15 236 aaKnown RBP7.44□□□□□ -1.22
C11orf54-212ENST00000533154 FOXD3Q9UJU5 478 aaPredicted RBP7.44□□□□□ -1.22
C11orf54-212ENST00000533154 INPP5FQ9Y2H2 1132 aa7.44□□□□□ -1.22
C11orf54-212ENST00000533154 ARAP3Q8WWN8 1544 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 FSTP19883 344 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 NOS3P29474 1203 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 GJA8P48165 433 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 CD97P48960 835 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 TAF1CQ15572 869 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-212ENST00000533154 ZNF394Q53GI3 561 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 HSH2DQ96JZ2 352 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 UBE2OQ9C0C9 1292 aaKnown RBP7.43□□□□□ -1.22
C11orf54-212ENST00000533154 C11orf16Q9NQ32 467 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 KCNMB2Q9Y691 235 aa7.43□□□□□ -1.22
C11orf54-212ENST00000533154 PHACTR2O75167 634 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 EPB42P16452 691 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
C11orf54-212ENST00000533154 GP2P55259 537 aaKnown RBP7.42□□□□□ -1.22
C11orf54-212ENST00000533154 USPL1Q5W0Q7 1092 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 BTLAQ7Z6A9 289 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 ZNF280CQ8ND82 737 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 BHMTQ93088 406 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 DNAJC2Q99543 621 aaKnown RBP7.42□□□□□ -1.22
C11orf54-212ENST00000533154 LNPKQ9C0E8 428 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 GGT7Q9UJ14 662 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 RTCBQ9Y3I0 505 aaKnown RBP7.42□□□□□ -1.22
C11orf54-212ENST00000533154 PCDHGB7Q9Y5F8 929 aa7.42□□□□□ -1.22
C11orf54-212ENST00000533154 UBAP1LF5GYI3 381 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 RAPGEF3O95398 923 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 USP17L7P0C7H9 530 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 AFF1P51825 1210 aaKnown RBP7.41□□□□□ -1.22
C11orf54-212ENST00000533154 RBL2Q08999 1139 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 PI16Q6UXB8 463 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 ERMP1Q7Z2K6 904 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 SLC51AQ86UW1 340 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 GALNT12Q8IXK2 581 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 EPS8L3Q8TE67 593 aaKnown RBP7.41□□□□□ -1.22
C11orf54-212ENST00000533154 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms