RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
C11orf54-212ENST00000533154 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
C11orf54-212ENST00000533154 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
C11orf54-212ENST00000533154 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
C11orf54-212ENST00000533154 FOXD1Q16676 465 aa21.65■■□□□ 1.06
C11orf54-212ENST00000533154 POTEDQ86YR6 584 aa20.98■□□□□ 0.95
C11orf54-212ENST00000533154 MSH5O43196 834 aa20.47■□□□□ 0.87
C11orf54-212ENST00000533154 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
C11orf54-212ENST00000533154 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
C11orf54-212ENST00000533154 PPP6R1Q9UPN7 881 aa19.8■□□□□ 0.76
C11orf54-212ENST00000533154 ADRA2BP18089 450 aa19.75■□□□□ 0.75
C11orf54-212ENST00000533154 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
C11orf54-212ENST00000533154 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
C11orf54-212ENST00000533154 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
C11orf54-212ENST00000533154 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
C11orf54-212ENST00000533154 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
C11orf54-212ENST00000533154 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
C11orf54-212ENST00000533154 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
C11orf54-212ENST00000533154 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
C11orf54-212ENST00000533154 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
C11orf54-212ENST00000533154 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
C11orf54-212ENST00000533154 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
C11orf54-212ENST00000533154 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
C11orf54-212ENST00000533154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
C11orf54-212ENST00000533154 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
C11orf54-212ENST00000533154 POTEHQ6S545 545 aa16.34■□□□□ 0.21
C11orf54-212ENST00000533154 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
C11orf54-212ENST00000533154 CAPN15O75808 1086 aa16.16■□□□□ 0.18
C11orf54-212ENST00000533154 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
C11orf54-212ENST00000533154 DSG3P32926 999 aa16.12■□□□□ 0.17
C11orf54-212ENST00000533154 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
C11orf54-212ENST00000533154 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
C11orf54-212ENST00000533154 ABCB7O75027 752 aa15.74■□□□□ 0.11
C11orf54-212ENST00000533154 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
C11orf54-212ENST00000533154 APLP2Q06481 763 aa15.64■□□□□ 0.09
C11orf54-212ENST00000533154 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
C11orf54-212ENST00000533154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
C11orf54-212ENST00000533154 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
C11orf54-212ENST00000533154 KCNA4P22459 653 aa15.42■□□□□ 0.06
C11orf54-212ENST00000533154 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
C11orf54-212ENST00000533154 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
C11orf54-212ENST00000533154 CHRDL2Q6WN34 429 aa15.31■□□□□ 0.04
C11orf54-212ENST00000533154 POLA2Q14181 598 aa15.16■□□□□ 0.02
C11orf54-212ENST00000533154 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
C11orf54-212ENST00000533154 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
C11orf54-212ENST00000533154 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
C11orf54-212ENST00000533154 PIP4P2Q8N4L2 257 aa14.82□□□□□ -0.04
C11orf54-212ENST00000533154 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
C11orf54-212ENST00000533154 ZBTB12Q9Y330 459 aaPredicted RBP14.77□□□□□ -0.05
C11orf54-212ENST00000533154 HAX1O00165 279 aa14.76□□□□□ -0.05
C11orf54-212ENST00000533154 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
C11orf54-212ENST00000533154 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
C11orf54-212ENST00000533154 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
C11orf54-212ENST00000533154 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
C11orf54-212ENST00000533154 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
C11orf54-212ENST00000533154 EVX2Q03828 476 aa14.49□□□□□ -0.09
C11orf54-212ENST00000533154 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
C11orf54-212ENST00000533154 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
C11orf54-212ENST00000533154 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
C11orf54-212ENST00000533154 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
C11orf54-212ENST00000533154 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
C11orf54-212ENST00000533154 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
C11orf54-212ENST00000533154 FBLN2P98095 1184 aa14.21□□□□□ -0.13
C11orf54-212ENST00000533154 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
C11orf54-212ENST00000533154 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
C11orf54-212ENST00000533154 ZBTB22O15209 634 aa14.14□□□□□ -0.15
C11orf54-212ENST00000533154 GABBR2O75899 941 aa14.13□□□□□ -0.15
C11orf54-212ENST00000533154 LHX8Q68G74 356 aa14.11□□□□□ -0.15
C11orf54-212ENST00000533154 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
C11orf54-212ENST00000533154 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
C11orf54-212ENST00000533154 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
C11orf54-212ENST00000533154 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
C11orf54-212ENST00000533154 SSUH2Q9Y2M2 353 aa13.99□□□□□ -0.17
C11orf54-212ENST00000533154 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
C11orf54-212ENST00000533154 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
C11orf54-212ENST00000533154 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
C11orf54-212ENST00000533154 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
C11orf54-212ENST00000533154 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
C11orf54-212ENST00000533154 PLSCR2Q9NRY7 297 aa13.78□□□□□ -0.2
C11orf54-212ENST00000533154 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
C11orf54-212ENST00000533154 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
C11orf54-212ENST00000533154 CLCN6P51797 869 aa13.63□□□□□ -0.23
C11orf54-212ENST00000533154 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
C11orf54-212ENST00000533154 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
C11orf54-212ENST00000533154 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
C11orf54-212ENST00000533154 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
C11orf54-212ENST00000533154 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
C11orf54-212ENST00000533154 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
C11orf54-212ENST00000533154 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
C11orf54-212ENST00000533154 POTEMA6NI47 508 aa13.33□□□□□ -0.28
C11orf54-212ENST00000533154 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
C11orf54-212ENST00000533154 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
C11orf54-212ENST00000533154 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
C11orf54-212ENST00000533154 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
C11orf54-212ENST00000533154 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
C11orf54-212ENST00000533154 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
C11orf54-212ENST00000533154 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
C11orf54-212ENST00000533154 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
C11orf54-212ENST00000533154 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
C11orf54-212ENST00000533154 PCDH10Q9P2E7 1040 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms