RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 SPRYD7Q5W111 196 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 SIAH1Q8IUQ4 282 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 SP7Q8TDD2 431 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 ANKS1AQ92625 1134 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 PHAXQ9H814 394 aaKnown RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 NSD1Q96L73 2696 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 MYH7P12883 1935 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 IL1R1P14778 569 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 COL19A1Q14993 1142 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 CCSAPQ6IQ19 270 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 APOBEC3HQ6NTF7 200 aaKnown RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 FBXO46Q6PJ61 603 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 G2E3Q7L622 706 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 ZFPM1Q8IX07 1006 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 TRMT2AQ8IZ69 625 aaKnown RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 NKX2-3Q8TAU0 364 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 TMC1Q8TDI8 760 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 PRMT6Q96LA8 375 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 PLA2G12BQ9BX93 195 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 HACL1Q9UJ83 578 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 PARP3Q9Y6F1 533 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 PCNX2A6NKB5 2137 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 MYH1P12882 1939 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 ASTN1O14525 1302 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 RABL6Q3YEC7 729 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 PNMA8AQ86V59 439 aaPredicted RBP2.47□□□□□ -2.01
KNL1-211ENST00000533001 TRIM47Q96LD4 638 aa2.47□□□□□ -2.01
KNL1-211ENST00000533001 MICAL3Q7RTP6 2002 aa2.46□□□□□ -2.01
KNL1-211ENST00000533001 EML5Q05BV3 1969 aa2.46□□□□□ -2.01
KNL1-211ENST00000533001 HCLS1P14317 486 aaPredicted RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 BMP8BP34820 402 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 CRHR2Q13324 411 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 CNBD1Q8NA66 436 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 MINPP1Q9UNW1 487 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 KCNH4Q9UQ05 1017 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 PTPN22Q9Y2R2 807 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 COL4A3Q01955 1670 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 HTATSF1O43719 755 aaKnown RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 SNX17Q15036 470 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 C8orf58Q8NAV2 365 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 H0YIN7 160 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 CA12O43570 354 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 RAD17O75943 681 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 GRAPQ13588 217 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 GPR153Q6NV75 609 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 MICALL2Q8IY33 904 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 GRAPLQ8TC17 118 aaPredicted RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 NBEAL1Q6ZS30 2694 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 NPM3O75607 178 aaKnown RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 TRPA1O75762 1119 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 TBC1D8O95759 1140 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 GJA8P48165 433 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 CTU1Q7Z7A3 348 aaKnown RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 IFNL1Q8IU54 200 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 PTPRDP23468 1912 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 KMT2CQ8NEZ4 4911 aaKnown RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 XDHP47989 1333 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 KIAA1217Q5T5P2 1943 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 PEX10O60683 326 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 SNRPA1P09661 255 aaKnown RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 PDE6BP35913 854 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 CABP4P57796 275 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 RHBDL3P58872 404 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 PLEKHO1Q53GL0 409 aaPredicted RBP2.46□□□□□ -2.02
KNL1-211ENST00000533001 RIPOR2Q9Y4F9 1068 aa2.46□□□□□ -2.02
KNL1-211ENST00000533001 IQCA1LA6NCM1 817 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 GNAT3A8MTJ3 354 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 FAM109BQ6ICB4 259 aaPredicted RBP2.45□□□□□ -2.02
KNL1-211ENST00000533001 CDC37L1Q7L3B6 337 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 SPRED2Q7Z698 418 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 RTKN2Q8IZC4 609 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 FAM89AQ96GI7 184 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 GGA3Q9NZ52 723 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 VWFP04275 2813 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 FOXP2O15409 715 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 HSP90AB1P08238 724 aaKnown RBP2.45□□□□□ -2.02
KNL1-211ENST00000533001 DIS3LQ8TF46 1054 aaKnown RBP2.45□□□□□ -2.02
KNL1-211ENST00000533001 NECTIN2Q92692 538 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 FMNL2Q96PY5 1086 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 KATNBL1Q9H079 304 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 ADCY6O43306 1168 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 TRIM32Q13049 653 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 NBPF12Q5TAG4 269 aaPredicted RBP2.45□□□□□ -2.02
KNL1-211ENST00000533001 CRIPAKQ8N1N5 446 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 TRPV1Q8NER1 839 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 TXNRD2Q9NNW7 524 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 NFIAQ12857 509 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 BABAM1Q9NWV8 329 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.45□□□□□ -2.02
KNL1-211ENST00000533001 C2orf16Q68DN1 1984 aa2.45□□□□□ -2.02
KNL1-211ENST00000533001 BBOX1O75936 387 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 ADGRE1Q14246 886 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 CC2D2BQ6DHV5 1058 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 COPS6Q7L5N1 327 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 USP48Q86UV5 1035 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 ANKRD44Q8N8A2 993 aa2.44□□□□□ -2.02
KNL1-211ENST00000533001 TDRD7Q8NHU6 1098 aaKnown RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 NIP7Q9Y221 180 aaKnown RBP eCLIP2.44□□□□□ -2.02
KNL1-211ENST00000533001 MYBBP1AQ9BQG0 1328 aaKnown RBP2.44□□□□□ -2.02
KNL1-211ENST00000533001 CELF2O95319 508 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms