RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 C6orf50Q9HD87 102 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 HOMER2Q9NSB8 354 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 NARFQ9UHQ1 456 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 ZBTB21Q9ULJ3 1066 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 UBA7P41226 1012 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 TSPY26PQ9H489 355 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-230ENST00000532245 PDIA4P13667 645 aaKnown RBP9.18□□□□□ -0.94
CTNND1-230ENST00000532245 GSE1Q14687 1217 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 TBC1D9BQ66K14 1250 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 NUP62CLQ9H1M0 184 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 FAM227BQ96M60 508 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 PAGR1Q9BTK6 254 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 CCDC192P0DO97 292 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 CHMLP26374 656 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 BTDP43251 543 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 DEFB132Q7Z7B7 95 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 FCHSD1Q86WN1 690 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 CERS3Q8IU89 383 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 LEMD3Q9Y2U8 911 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 COL15A1P39059 1388 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 MARCH10Q8NA82 808 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-230ENST00000532245 SLC1A4P43007 532 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 CCDC70Q6NSX1 233 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 GADL1Q6ZQY3 521 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 KBTBD3Q8NAB2 608 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 ARID3AQ99856 593 aa9.17□□□□□ -0.94
CTNND1-230ENST00000532245 ABT1Q9ULW3 272 aaKnown RBP9.17□□□□□ -0.94
CTNND1-230ENST00000532245 ZMYM4Q5VZL5 1548 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 TRIM21P19474 475 aaKnown RBP9.16□□□□□ -0.94
CTNND1-230ENST00000532245 SMARCE1Q969G3 411 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 PTPDC1A2A3K4 754 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 PDE8BO95263 885 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 TMC4Q7Z404 712 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 BICD1Q96G01 975 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 PHKA1P46020 1223 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 GRAPQ13588 217 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 EZH2Q15910 746 aaKnown RBP9.16□□□□□ -0.94
CTNND1-230ENST00000532245 DCAF15Q66K64 600 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 GRAPLQ8TC17 118 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-230ENST00000532245 DEF6Q9H4E7 631 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 ZNHIT6Q9NWK9 470 aaKnown RBP9.16□□□□□ -0.94
CTNND1-230ENST00000532245 RNF181Q9P0P0 153 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 CYP19A1P11511 503 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-230ENST00000532245 UBE4AQ14139 1066 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 FAM47AQ5JRC9 791 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 FNBP4Q8N3X1 1017 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-230ENST00000532245 ERMNQ8TAM6 284 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 PTPRUQ92729 1446 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 ADORA1P30542 326 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 RBM25P49756 843 aaKnown RBP9.16□□□□□ -0.94
CTNND1-230ENST00000532245 CIAPIN1Q6FI81 312 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 SMC5Q8IY18 1101 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 SYCP3Q8IZU3 236 aa9.16□□□□□ -0.94
CTNND1-230ENST00000532245 BACH1O14867 736 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 ADRA2BP18089 450 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 MKRN3Q13064 507 aaKnown RBP9.15□□□□□ -0.94
CTNND1-230ENST00000532245 TSG101Q99816 390 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 SCAND2PQ9GZW5 306 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-230ENST00000532245 GOPCQ9HD26 462 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 ZBED4O75132 1171 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 NSMFQ6X4W1 530 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 DHX32Q7L7V1 743 aaKnown RBP9.15□□□□□ -0.94
CTNND1-230ENST00000532245 CNNM3Q8NE01 707 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 SDR42E1Q8WUS8 393 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 SOS2Q07890 1332 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-230ENST00000532245 STX6O43752 255 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 USH1GQ495M9 461 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 KIFC2Q96AC6 838 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 CLIP2Q9UDT6 1046 aa9.15□□□□□ -0.94
CTNND1-230ENST00000532245 USP17L12C9JPN9 530 aa9.15□□□□□ -0.95
CTNND1-230ENST00000532245 USP17L21D6R901 530 aa9.15□□□□□ -0.95
CTNND1-230ENST00000532245 NOM1Q5C9Z4 860 aaKnown RBP9.15□□□□□ -0.95
CTNND1-230ENST00000532245 PPFIBP1Q86W92 1011 aa9.15□□□□□ -0.95
CTNND1-230ENST00000532245 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.95
CTNND1-230ENST00000532245 NOD1Q9Y239 953 aa9.15□□□□□ -0.95
CTNND1-230ENST00000532245 RAD50Q92878 1312 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 SSH2Q76I76 1423 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 EAF2Q96CJ1 260 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-230ENST00000532245 TBCAO75347 108 aaKnown RBP9.14□□□□□ -0.95
CTNND1-230ENST00000532245 MYCLP12524 364 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-230ENST00000532245 CPA1P15085 419 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 TFAP4Q01664 338 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 TMX3Q96JJ7 454 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 GDPD2Q9HCC8 539 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 CHRNA5P30532 468 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 FSIP1Q8NA03 581 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 SPC24Q8NBT2 197 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 EIF5P55010 431 aaKnown RBP9.14□□□□□ -0.95
CTNND1-230ENST00000532245 KIF22Q14807 665 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 CC2D2BQ6DHV5 1058 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms