RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 MINPP1Q9UNW1 487 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 DDX49Q9Y6V7 483 aaKnown RBP14.51□□□□□ -0.09
CHD7-211ENST00000532149 PFKFB2O60825 505 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 IDH1O75874 414 aaKnown RBP14.5□□□□□ -0.09
CHD7-211ENST00000532149 PHF14O94880 888 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 FGAP02671 866 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 SYT1P21579 422 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 ST5P78524 1137 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 TOB2Q14106 344 aaPredicted RBP14.5□□□□□ -0.09
CHD7-211ENST00000532149 ME3Q16798 604 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 C15orf52Q6ZUT6 534 aaKnown RBP14.5□□□□□ -0.09
CHD7-211ENST00000532149 GTF3C6Q969F1 213 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 SEC62Q99442 399 aaKnown RBP14.5□□□□□ -0.09
CHD7-211ENST00000532149 RNF41Q9H4P4 317 aaPredicted RBP14.5□□□□□ -0.09
CHD7-211ENST00000532149 ZSCAN16Q9H4T2 348 aaPredicted RBP14.5□□□□□ -0.09
CHD7-211ENST00000532149 TPCN1Q9ULQ1 816 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 ZDHHC9Q9Y397 364 aa14.5□□□□□ -0.09
CHD7-211ENST00000532149 TCRBV5S4A2TA0A5A2 114 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 GOLGA6L3A6NEY3 463 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 FAM177BA6PVY3 158 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 M0R2C6 588 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 LETM1O95202 739 aaPredicted RBP14.49□□□□□ -0.09
CHD7-211ENST00000532149 GJB2P29033 226 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 RASGRF1Q13972 1273 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 SCARF1Q14162 830 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 MCTP1Q6DN14 999 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 Q6ZUG5 572 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 FBXO33Q7Z6M2 555 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 TMTC2Q8N394 836 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 TMEM87BQ96K49 555 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 TMEM106CQ9BVX2 250 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 KRT23Q9C075 422 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 LRP2BPQ9P2M1 347 aa14.49□□□□□ -0.09
CHD7-211ENST00000532149 ZNF532Q9HCE3 1301 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 BBOX1O75936 387 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 MRE11P49959 708 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 RCAN1P53805 252 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 GRAPQ13588 217 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 PPP2R5BQ15173 497 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 IER5LQ5T953 404 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 LARP1BQ659C4 914 aaKnown RBP14.48□□□□□ -0.09
CHD7-211ENST00000532149 MAMSTRQ6ZN01 415 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 CCDC83Q8IWF9 413 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 GRAPLQ8TC17 118 aaPredicted RBP14.48□□□□□ -0.09
CHD7-211ENST00000532149 STRBPQ96SI9 672 aaKnown RBP14.48□□□□□ -0.09
CHD7-211ENST00000532149 LMBRD1Q9NUN5 540 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
CHD7-211ENST00000532149 CDKL5O76039 1030 aa14.47□□□□□ -0.09
CHD7-211ENST00000532149 F13A1P00488 732 aa14.47□□□□□ -0.09
CHD7-211ENST00000532149 CPLX2Q6PUV4 134 aaKnown RBP14.47□□□□□ -0.09
CHD7-211ENST00000532149 NLGN1Q8N2Q7 840 aa14.47□□□□□ -0.09
CHD7-211ENST00000532149 RBM17Q96I25 401 aaKnown RBP14.47□□□□□ -0.09
CHD7-211ENST00000532149 PUS7LQ9H0K6 701 aaKnown RBP14.47□□□□□ -0.09
CHD7-211ENST00000532149 PIH1D3Q9NQM4 214 aaKnown RBP14.47□□□□□ -0.09
CHD7-211ENST00000532149 DUOX1Q9NRD9 1551 aa14.47□□□□□ -0.09
CHD7-211ENST00000532149 C4AP0C0L4 1744 aa14.46□□□□□ -0.09
CHD7-211ENST00000532149 UBR3Q6ZT12 1888 aa14.46□□□□□ -0.09
CHD7-211ENST00000532149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 HIBADHP31937 336 aaKnown RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 LCE2DQ5TA82 110 aaPredicted RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 NAA16Q6N069 864 aaPredicted RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 NOL8Q76FK4 1167 aaKnown RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 FAM184AQ8NB25 1140 aa14.46□□□□□ -0.09
CHD7-211ENST00000532149 HELBQ8NG08 1087 aaPredicted RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 SMARCC2Q8TAQ2 1214 aa14.46□□□□□ -0.09
CHD7-211ENST00000532149 SCAND2PQ9GZW5 306 aaPredicted RBP14.46□□□□□ -0.09
CHD7-211ENST00000532149 NAPBQ9H115 298 aa14.46□□□□□ -0.09
CHD7-211ENST00000532149 SALL1Q9NSC2 1324 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 A0A1B0GUL6 1792 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 FSD2A1L4K1 749 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 TM4SF1P30408 202 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 HOXA10P31260 410 aaPredicted RBP14.45□□□□□ -0.1
CHD7-211ENST00000532149 LIFRP42702 1097 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 BCAMP50895 628 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 CRY2Q49AN0 593 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 BICDL1Q6ZP65 573 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 WDR66Q8TBY9 1149 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 RPGRQ92834 1020 aaKnown RBP14.45□□□□□ -0.1
CHD7-211ENST00000532149 BRF1Q92994 677 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 CRAMP1Q96RY5 1269 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 SRP68Q9UHB9 627 aaKnown RBP14.45□□□□□ -0.1
CHD7-211ENST00000532149 PCDHB8Q9UN66 801 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 LAMA4Q16363 1823 aa14.45□□□□□ -0.1
CHD7-211ENST00000532149 ELP1O95163 1332 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 XDHP47989 1333 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 KLRG2A4D1S0 409 aaPredicted RBP14.44□□□□□ -0.1
CHD7-211ENST00000532149 PRPF40AO75400 957 aaKnown RBP14.44□□□□□ -0.1
CHD7-211ENST00000532149 APPP05067 770 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 CPA1P15085 419 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 ATP2B4P23634 1241 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 ZNF445P59923 1031 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 UBE2HP62256 183 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 KRT85P78386 507 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 GSTO1P78417 241 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 NFIXQ14938 502 aa14.44□□□□□ -0.1
CHD7-211ENST00000532149 MB21D2Q8IYB1 491 aaPredicted RBP14.44□□□□□ -0.1
CHD7-211ENST00000532149 MAGEB6Q8N7X4 407 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms