RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 GRPEL1Q9HAV7 217 aa8.89□□□□□ -0.99
PACS1-211ENST00000531298 CCNL1Q9UK58 526 aaPredicted RBP8.89□□□□□ -0.99
PACS1-211ENST00000531298 MYH13Q9UKX3 1938 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 MYH15Q9Y2K3 1946 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 CCDC88AQ3V6T2 1871 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 MYO5AQ9Y4I1 1855 aaKnown RBP8.88□□□□□ -0.99
PACS1-211ENST00000531298 LARGE1O95461 756 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 RPS8P62241 208 aaKnown RBP8.88□□□□□ -0.99
PACS1-211ENST00000531298 HS1BP3Q53T59 392 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 CAVIN4Q5BKX8 364 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 LRSAM1Q6UWE0 723 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 CCDC129Q6ZRS4 1044 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 FBXO33Q7Z6M2 555 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 RALYLQ86SE5 291 aaKnown RBP8.88□□□□□ -0.99
PACS1-211ENST00000531298 KRT23Q9C075 422 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 PUS7LQ9H0K6 701 aaKnown RBP8.88□□□□□ -0.99
PACS1-211ENST00000531298 RNF41Q9H4P4 317 aaPredicted RBP8.88□□□□□ -0.99
PACS1-211ENST00000531298 ANAPC4Q9UJX5 808 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 CFAP45Q9UL16 551 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 LEMD3Q9Y2U8 911 aa8.88□□□□□ -0.99
PACS1-211ENST00000531298 AFF2P51816 1311 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 ZNF532Q9HCE3 1301 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 CDKL5O76039 1030 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 FGRP09769 529 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 XRCC6P12956 609 aaKnown RBP eCLIP8.87□□□□□ -0.99
PACS1-211ENST00000531298 PDIA3P30101 505 aaKnown RBP8.87□□□□□ -0.99
PACS1-211ENST00000531298 RASGRF1Q13972 1273 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 UVSSAQ2YD98 709 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 ZSCAN23Q3MJ62 389 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 TRAPPC3LQ5T215 181 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 GPT2Q8TD30 523 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 AIDAQ96BJ3 306 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 PIH1D3Q9NQM4 214 aaKnown RBP8.87□□□□□ -0.99
PACS1-211ENST00000531298 SEC31BQ9NQW1 1179 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 MINPP1Q9UNW1 487 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 CACNA1SQ13698 1873 aa8.87□□□□□ -0.99
PACS1-211ENST00000531298 KLRG2A4D1S0 409 aaPredicted RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 GNPATO15228 680 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 CAVIN2O95810 425 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 CPA1P15085 419 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 FGD1P98174 961 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 SCRN1Q12765 414 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 CRY2Q49AN0 593 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 ERFEQ4G0M1 354 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 CCDC183Q5T5S1 534 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 TBC1D9BQ66K14 1250 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 SPTY2D1Q68D10 685 aaPredicted RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 CPLX2Q6PUV4 134 aaKnown RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 USP48Q86UV5 1035 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 NBPF5PQ86XG9 351 aaPredicted RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 NSUN7Q8NE18 718 aaKnown RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 STAG1Q8WVM7 1258 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 ANP32BQ92688 251 aaKnown RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 BRF1Q92994 677 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 PPP1R9BQ96SB3 815 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 BRIP1Q9BX63 1249 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 TAOK2Q9UL54 1235 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 ANGEL1Q9UNK9 670 aaKnown RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 NDUFB9Q9Y6M9 179 aa8.86□□□□□ -0.99
PACS1-211ENST00000531298 MORC2Q9Y6X9 1032 aaPredicted RBP8.86□□□□□ -0.99
PACS1-211ENST00000531298 STK36Q9NRP7 1315 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 IRS2Q9Y4H2 1338 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 PLSCR1O15162 318 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 IDH1O75874 414 aaKnown RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 GTF2E1P29083 439 aaPredicted RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 TM4SF1P30408 202 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 HOXA10P31260 410 aaPredicted RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 RFC4P35249 363 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 CCDC173Q0VFZ6 552 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 MEX3CQ5U5Q3 659 aaKnown RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 CAVIN1Q6NZI2 390 aaKnown RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 NOL8Q76FK4 1167 aaKnown RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 BRAPQ7Z569 592 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 IFNL3Q8IZI9 196 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 FAM177A1Q8N128 213 aaPredicted RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 CCDC85AQ96PX6 553 aaPredicted RBP8.85□□□□□ -0.99
PACS1-211ENST00000531298 TAF6LQ9Y6J9 622 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 NRXN2Q9P2S2 1712 aa8.85□□□□□ -0.99
PACS1-211ENST00000531298 CCDC196A0A1B0GTZ2 297 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 GSG1L2A8MUP6 293 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 PRC1O43663 620 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 BBOX1O75936 387 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 RESTQ13127 1097 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 GRAPQ13588 217 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 SART3Q15020 963 aaKnown RBP8.84□□□□□ -0.99
PACS1-211ENST00000531298 AKNAD1Q5T1N1 836 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 NECAB1Q8N987 351 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 GRAPLQ8TC17 118 aaPredicted RBP8.84□□□□□ -0.99
PACS1-211ENST00000531298 WASF1Q92558 559 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 FAM84BQ96KN1 310 aaPredicted RBP8.84□□□□□ -0.99
PACS1-211ENST00000531298 ZNF396Q96N95 335 aaPredicted RBP8.84□□□□□ -0.99
PACS1-211ENST00000531298 CRAMP1Q96RY5 1269 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 NAPBQ9H115 298 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 ATP8A2Q9NTI2 1148 aa8.84□□□□□ -0.99
PACS1-211ENST00000531298 DDX19AQ9NUU7 478 aaKnown RBP8.84□□□□□ -0.99
PACS1-211ENST00000531298 TMEM63CQ9P1W3 806 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms