RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PPP1R3GB7ZBB8 358 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 TCIRG1Q13488 830 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 MTFR1Q15390 333 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 HLFQ16534 295 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 KRT24Q2M2I5 525 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 DPP8Q6V1X1 898 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-212ENST00000528930 LRP10Q7Z4F1 713 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 NUTM1Q86Y26 1132 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 MAFAQ8NHW3 353 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-212ENST00000528930 RABGEF1Q9UJ41 708 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 IRS2Q9Y4H2 1338 aa10.99□□□□□ -0.65
SSBP3-212ENST00000528930 MUC6Q6W4X9 2439 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 FARP2O94887 1054 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-212ENST00000528930 GJB1P08034 283 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 ZBTB48P10074 688 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-212ENST00000528930 MYL6BP14649 208 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-212ENST00000528930 ARHGEF6Q15052 776 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 LDLRAD1Q5T700 205 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 TTLL7Q6ZT98 887 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 NGEFQ8N5V2 710 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 ANKK1Q8NFD2 765 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 NYXQ9GZU5 481 aa10.98□□□□□ -0.65
SSBP3-212ENST00000528930 LAS1LQ9Y4W2 734 aaKnown RBP10.98□□□□□ -0.65
SSBP3-212ENST00000528930 ERVV-1B6SEH8 477 aa10.97□□□□□ -0.65
SSBP3-212ENST00000528930 EIF2S2P20042 333 aaKnown RBP10.97□□□□□ -0.65
SSBP3-212ENST00000528930 ZNF280AP59817 542 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-212ENST00000528930 SCARF1Q14162 830 aa10.97□□□□□ -0.65
SSBP3-212ENST00000528930 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
SSBP3-212ENST00000528930 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
SSBP3-212ENST00000528930 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-212ENST00000528930 MBIPQ9NS73 344 aa10.97□□□□□ -0.65
SSBP3-212ENST00000528930 ECM29Q5VYK3 1845 aa10.97□□□□□ -0.65
SSBP3-212ENST00000528930 MGAMO43451 1857 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 COL4A1P02462 1669 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 ABCC4O15439 1325 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 MAP3K15Q6ZN16 1313 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 ANXA1P04083 346 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 TTLL12Q14166 644 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-212ENST00000528930 MFSD10Q14728 455 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 CCDC27Q2M243 656 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 SP8Q8IXZ3 490 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
SSBP3-212ENST00000528930 CDH23Q9H251 3354 aa10.96□□□□□ -0.66
SSBP3-212ENST00000528930 HOXB7P09629 217 aa10.95□□□□□ -0.66
SSBP3-212ENST00000528930 GNAI1P63096 354 aa10.95□□□□□ -0.66
SSBP3-212ENST00000528930 PRAMEF18Q5VWM3 479 aa10.95□□□□□ -0.66
SSBP3-212ENST00000528930 WWC1Q8IX03 1113 aa10.95□□□□□ -0.66
SSBP3-212ENST00000528930 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
SSBP3-212ENST00000528930 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
SSBP3-212ENST00000528930 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
SSBP3-212ENST00000528930 ARMC9Q7Z3E5 817 aa10.94□□□□□ -0.66
SSBP3-212ENST00000528930 WNK4Q96J92 1243 aa10.94□□□□□ -0.66
SSBP3-212ENST00000528930 ZBTB3Q9H5J0 574 aa10.94□□□□□ -0.66
SSBP3-212ENST00000528930 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
SSBP3-212ENST00000528930 BDP1A6H8Y1 2624 aa10.94□□□□□ -0.66
SSBP3-212ENST00000528930 UBN2Q6ZU65 1347 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-212ENST00000528930 VIL1P09327 827 aaKnown RBP10.93□□□□□ -0.66
SSBP3-212ENST00000528930 NF2P35240 595 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 PRMT2P55345 433 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 OTUD7BQ6GQQ9 843 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 GIGYF2Q6Y7W6 1299 aaKnown RBP10.93□□□□□ -0.66
SSBP3-212ENST00000528930 KIF6Q6ZMV9 814 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 COPS6Q7L5N1 327 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 ZNF34Q8IZ26 560 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 CDX2Q99626 313 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-212ENST00000528930 PTPN18Q99952 460 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 KCNQ5Q9NR82 932 aa10.93□□□□□ -0.66
SSBP3-212ENST00000528930 SEPT9Q9UHD8 586 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-212ENST00000528930 SCAF8Q9UPN6 1271 aaKnown RBP10.93□□□□□ -0.66
SSBP3-212ENST00000528930 CCL5P13501 91 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-212ENST00000528930 HDGFL1Q5TGJ6 251 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 FAM9BQ8IZU0 186 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 C8orf58Q8NAV2 365 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 XAGE3Q8WTP9 111 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 U2AF1L4Q8WU68 220 aaKnown RBP10.92□□□□□ -0.66
SSBP3-212ENST00000528930 ZFRQ96KR1 1074 aaKnown RBP10.92□□□□□ -0.66
SSBP3-212ENST00000528930 FAM161BQ96MY7 647 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 CHPF2Q9P2E5 772 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 HCN4Q9Y3Q4 1203 aa10.92□□□□□ -0.66
SSBP3-212ENST00000528930 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
SSBP3-212ENST00000528930 SOWAHBA6NEL2 793 aa10.91□□□□□ -0.66
SSBP3-212ENST00000528930 ELL2O00472 640 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-212ENST00000528930 ECE2O60344 883 aa10.91□□□□□ -0.66
SSBP3-212ENST00000528930 BBOX1O75936 387 aa10.91□□□□□ -0.66
SSBP3-212ENST00000528930 GNRH1P01148 92 aa10.91□□□□□ -0.66
SSBP3-212ENST00000528930 GPTP24298 496 aa10.91□□□□□ -0.66
SSBP3-212ENST00000528930 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
SSBP3-212ENST00000528930 SUSD4Q5VX71 490 aa10.91□□□□□ -0.66
SSBP3-212ENST00000528930 ALYREFQ86V81 257 aaKnown RBP10.91□□□□□ -0.66
SSBP3-212ENST00000528930 IL16Q14005 1332 aa10.9□□□□□ -0.66
SSBP3-212ENST00000528930 COL1A1P02452 1464 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-212ENST00000528930 NTSR2O95665 410 aa10.9□□□□□ -0.66
SSBP3-212ENST00000528930 CAPN2P17655 700 aa10.9□□□□□ -0.66
SSBP3-212ENST00000528930 AIMP1Q12904 312 aaKnown RBP10.9□□□□□ -0.66
SSBP3-212ENST00000528930 WASHC4Q2M389 1173 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms