RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 UBXN1Q04323 297 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 PLS1Q14651 629 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 USP26Q9BXU7 913 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.874e-6■□□□□ 11.2
CTNND1-219ENST00000528621 PLCD1P51178 756 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 CEP128Q6ZU80 1094 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 PPP1R14CQ8TAE6 165 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 GOLGA1Q92805 767 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 TESK2Q96S53 571 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 METTL22Q9BUU2 404 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-219ENST00000528621 PRDM10Q9NQV6 1147 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 TMEM110-MUSTN1A8MSY1 372 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 POLD1P28340 1107 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 NOLC1Q14978 699 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNND1-219ENST00000528621 TTC6Q86TZ1 520 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 UBAP1LF5GYI3 381 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 IVLP07476 585 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 TYRO3Q06418 890 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 DTHD1Q6ZMT9 781 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 EYA1Q99502 592 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNND1-219ENST00000528621 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 PPP2R5BQ15173 497 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 RGS22Q8NE09 1264 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 ATP2A1O14983 1001 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 RPL13P26373 211 aaKnown RBP9.59□□□□□ -0.87
CTNND1-219ENST00000528621 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 PUM3Q15397 648 aaKnown RBP9.59□□□□□ -0.87
CTNND1-219ENST00000528621 TSPYL6Q8N831 410 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 UBE2Q2Q8WVN8 375 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 TTC14Q96N46 770 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 GSTA5Q7RTV2 222 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 ZNF354CQ86Y25 554 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 IQUBQ8NA54 791 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 CABLES1Q8TDN4 633 aa9.59□□□□□ -0.87
CTNND1-219ENST00000528621 BLMP54132 1417 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-219ENST00000528621 CA8P35219 290 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 KIF5AQ12840 1032 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 VWA3BQ502W6 1294 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 CHST3Q7LGC8 479 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 KRT222Q8N1A0 295 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 DEXIO95424 95 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 ZC3H12CQ9C0D7 883 aaKnown RBP9.58□□□□□ -0.88
CTNND1-219ENST00000528621 TFCP2L1Q9NZI6 479 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 GCP02774 474 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 GTF2F1P35269 517 aaKnown RBP eCLIP9.58□□□□□ -0.885e-6■■■□□ 17.8
CTNND1-219ENST00000528621 CNGA4Q8IV77 575 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 CCDC65Q8IXS2 484 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 ZNF830Q96NB3 372 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-219ENST00000528621 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 GRIPAP1Q4V328 841 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 HSP90AA4PQ58FG1 418 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 SV2BQ7L1I2 683 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 CCDC50Q8IVM0 306 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 LZTS2Q9BRK4 669 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 CLEC11AQ9Y240 323 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 ZBTB7BO15156 539 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-219ENST00000528621 PDE8AO60658 829 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 MBD4O95243 580 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 IL13P35225 146 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 HS2ST1Q7LGA3 356 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 CCDC186Q7Z3E2 898 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 ARFGAP3Q9NP61 516 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 CTNND2Q9UQB3 1225 aa9.58□□□□□ -0.88
CTNND1-219ENST00000528621 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 RILPL1Q5EBL4 403 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 VTI1AQ96AJ9 217 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 IQCGQ9H095 443 aaKnown RBP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 DNAI1Q9UI46 699 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 SLU7O95391 586 aaKnown RBP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 EEF2P13639 858 aaKnown RBP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 TNNI3KQ59H18 835 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 FPGT-TNNI3KV9GXZ4 949 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 EYA2O00167 538 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 ITGA6P23229 1130 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 JAKMIP2Q96AA8 810 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 CALUO43852 315 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 TNNQ9UQP3 1299 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 ZKSCAN5Q9Y2L8 839 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 MROH5Q6ZUA9 1318 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 DKC1O60832 514 aaKnown RBP eCLIP9.57□□□□□ -0.88
CTNND1-219ENST00000528621 PTGS1P23219 599 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 CLCN1P35523 988 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 GJC1P36383 396 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 JDP2Q8WYK2 163 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 HOOK2Q96ED9 719 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 PODXL2Q9NZ53 605 aa9.57□□□□□ -0.88
CTNND1-219ENST00000528621 CNNM4Q6P4Q7 775 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms