RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
USH1C-204ENST00000526313 PHF14O94880 888 aa18.75■□□□□ 0.59
USH1C-204ENST00000526313 RPS8P62241 208 aaKnown RBP18.75■□□□□ 0.59
USH1C-204ENST00000526313 RALYLQ86SE5 291 aaKnown RBP18.75■□□□□ 0.59
USH1C-204ENST00000526313 TTC6Q86TZ1 520 aa18.75■□□□□ 0.59
USH1C-204ENST00000526313 IFNL3Q8IZI9 196 aa18.75■□□□□ 0.59
USH1C-204ENST00000526313 DDX11Q96FC9 970 aa18.75■□□□□ 0.59
USH1C-204ENST00000526313 EPB41L4AQ9HCS5 686 aaPredicted RBP18.75■□□□□ 0.59
USH1C-204ENST00000526313 GNL3LQ9NVN8 582 aaKnown RBP18.75■□□□□ 0.59
USH1C-204ENST00000526313 HPS5Q9UPZ3 1129 aa18.75■□□□□ 0.59
USH1C-204ENST00000526313 KIF3AQ9Y496 699 aa18.75■□□□□ 0.59
USH1C-204ENST00000526313 GSG1L2A8MUP6 293 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 TM4SF1P30408 202 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 CCT2P78371 535 aaKnown RBP18.74■□□□□ 0.59
USH1C-204ENST00000526313 CCDC183Q5T5S1 534 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 FAM184AQ8NB25 1140 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 BCL11BQ9C0K0 894 aaPredicted RBP18.74■□□□□ 0.59
USH1C-204ENST00000526313 SCAND2PQ9GZW5 306 aaPredicted RBP18.74■□□□□ 0.59
USH1C-204ENST00000526313 NCOA5Q9HCD5 579 aaKnown RBP18.74■□□□□ 0.59
USH1C-204ENST00000526313 C4AP0C0L4 1744 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 MBD4O95243 580 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 GNAT2P19087 354 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 FAM84BQ96KN1 310 aaPredicted RBP18.74■□□□□ 0.59
USH1C-204ENST00000526313 PPP1R9BQ96SB3 815 aa18.74■□□□□ 0.59
USH1C-204ENST00000526313 WTIPA6NIX2 430 aaPredicted RBP18.73■□□□□ 0.59
USH1C-204ENST00000526313 APPP05067 770 aa18.73■□□□□ 0.59
USH1C-204ENST00000526313 TRDNQ13061 729 aa18.73■□□□□ 0.59
USH1C-204ENST00000526313 FAM173BQ6P4H8 233 aa18.73■□□□□ 0.59
USH1C-204ENST00000526313 LETM1O95202 739 aaPredicted RBP18.73■□□□□ 0.59
USH1C-204ENST00000526313 FDPSP14324 419 aaKnown RBP18.73■□□□□ 0.59
USH1C-204ENST00000526313 GYG1P46976 350 aa18.73■□□□□ 0.59
USH1C-204ENST00000526313 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
USH1C-204ENST00000526313 ARMT1Q9H993 441 aa18.73■□□□□ 0.59
USH1C-204ENST00000526313 COL1A1P02452 1464 aaPredicted RBP18.72■□□□□ 0.59
USH1C-204ENST00000526313 H3BQV1 296 aa18.72■□□□□ 0.59
USH1C-204ENST00000526313 TRAPPC3LQ5T215 181 aa18.72■□□□□ 0.59
USH1C-204ENST00000526313 IFFO2Q5TF58 517 aa18.72■□□□□ 0.59
USH1C-204ENST00000526313 CYB5R4Q7L1T6 521 aa18.72■□□□□ 0.59
USH1C-204ENST00000526313 TIAM2Q8IVF5 1701 aa18.72■□□□□ 0.59
USH1C-204ENST00000526313 PDS5AQ29RF7 1337 aaKnown RBP18.72■□□□□ 0.59
USH1C-204ENST00000526313 SEMA3EO15041 775 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 RGS22Q8NE09 1264 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 LRP2BPQ9P2M1 347 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 KLF18A0A0U1RQI7 1052 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 SH2B2O14492 632 aaPredicted RBP18.71■□□□□ 0.59
USH1C-204ENST00000526313 DHX16O60231 1041 aaKnown RBP18.71■□□□□ 0.59
USH1C-204ENST00000526313 ADRA2BP18089 450 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 ADD1P35611 737 aaKnown RBP18.71■□□□□ 0.59
USH1C-204ENST00000526313 CAVIN4Q5BKX8 364 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 LEO1Q8WVC0 666 aaPredicted RBP18.71■□□□□ 0.59
USH1C-204ENST00000526313 TMEM87BQ96K49 555 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 ANKRD2Q9GZV1 360 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 LRRC4BQ9NT99 713 aa18.71■□□□□ 0.59
USH1C-204ENST00000526313 ANGEL1Q9UNK9 670 aaKnown RBP18.71■□□□□ 0.59
USH1C-204ENST00000526313 CCDC173Q0VFZ6 552 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 FAM196AQ6ZSG2 479 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 FAM43AQ8N2R8 423 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 NAPBQ9H115 298 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 CARMIL3Q8ND23 1372 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 CACNA1SQ13698 1873 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 RFC4P35249 363 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 IGDCC4Q8TDY8 1250 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 TSPY26PQ9H489 355 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 TACC3Q9Y6A5 838 aa18.7■□□□□ 0.58
USH1C-204ENST00000526313 PRKAB2O43741 272 aa18.69■□□□□ 0.58
USH1C-204ENST00000526313 SGMS1Q86VZ5 419 aa18.69■□□□□ 0.58
USH1C-204ENST00000526313 TFIP11Q9UBB9 837 aaKnown RBP18.69■□□□□ 0.58
USH1C-204ENST00000526313 NEDD4P46934 1319 aa18.69■□□□□ 0.58
USH1C-204ENST00000526313 IRS2Q9Y4H2 1338 aa18.69■□□□□ 0.58
USH1C-204ENST00000526313 ATL3Q6DD88 541 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 ADGRA1Q86SQ6 560 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 NACAP1Q9BZK3 213 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 IQSEC3Q9UPP2 1182 aaPredicted RBP18.68■□□□□ 0.58
USH1C-204ENST00000526313 GOLGA8BA8MQT2 603 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 B4E1Z4 1266 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 CYP7A1P22680 504 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 NFIXQ14938 502 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 AKNAD1Q5T1N1 836 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 STAG1Q8WVM7 1258 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 SPATA32Q96LK8 384 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 CNNM2Q9H8M5 875 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 NAP1L2Q9ULW6 460 aaPredicted RBP18.68■□□□□ 0.58
USH1C-204ENST00000526313 SLC4A4Q9Y6R1 1079 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 CHD4Q14839 1912 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 MYH15Q9Y2K3 1946 aa18.68■□□□□ 0.58
USH1C-204ENST00000526313 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
USH1C-204ENST00000526313 LIFRP42702 1097 aa18.67■□□□□ 0.58
USH1C-204ENST00000526313 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
USH1C-204ENST00000526313 CFAP45Q9UL16 551 aa18.67■□□□□ 0.58
USH1C-204ENST00000526313 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
USH1C-204ENST00000526313 PDLIM2Q96JY6 352 aa18.67■□□□□ 0.58
USH1C-204ENST00000526313 MTA3Q9BTC8 594 aa18.67■□□□□ 0.58
USH1C-204ENST00000526313 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
USH1C-204ENST00000526313 ZNF384Q8TF68 577 aa18.66■□□□□ 0.58
USH1C-204ENST00000526313 FUCA2Q9BTY2 467 aa18.66■□□□□ 0.58
USH1C-204ENST00000526313 KRT23Q9C075 422 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms