RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DLL1O00548 723 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 FSCN2O14926 492 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 PAX4O43316 350 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 CCDC27Q2M243 656 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 TXNDC11Q6PKC3 985 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 EPS8L3Q8TE67 593 aaKnown RBP7.06□□□□□ -1.28
USP48-211ENST00000526044 WNT8BQ93098 351 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 RAPGEF2Q9Y4G8 1499 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 A0A096LPE4 126 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 A0A1W2PPZ6 126 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 ANKRD33BA6NCL7 494 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 METTL12A8MUP2 240 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 PIP4K2BP78356 416 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 COL19A1Q14993 1142 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 SHISA2Q6UWI4 295 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 VN1R5Q7Z5H4 357 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 KLHL23Q8NBE8 558 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 FBF1Q8TES7 1133 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 SEC31BQ9NQW1 1179 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 TRAK1Q9UPV9 953 aa7.05□□□□□ -1.28
USP48-211ENST00000526044 SYNJ2O15056 1496 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 PRXQ9BXM0 1461 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 CD68P34810 354 aaPredicted RBP7.04□□□□□ -1.28
USP48-211ENST00000526044 TXKP42681 527 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 GRIA4P48058 902 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 ARL4DP49703 201 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 ATP2B2Q01814 1243 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 IKBKEQ14164 716 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 SPRED3Q2MJR0 410 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 MCTP1Q6DN14 999 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 ALG1LQ6GMV1 187 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 GALNT11Q8NCW6 608 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 OSGEPQ9NPF4 335 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 RNF112Q9ULX5 631 aa7.04□□□□□ -1.28
USP48-211ENST00000526044 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
USP48-211ENST00000526044 P4HBP07237 508 aaKnown RBP7.03□□□□□ -1.28
USP48-211ENST00000526044 GRM2Q14416 872 aa7.03□□□□□ -1.28
USP48-211ENST00000526044 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP48-211ENST00000526044 PRPF40BQ6NWY9 871 aaKnown RBP7.03□□□□□ -1.28
USP48-211ENST00000526044 DNAJC14Q6Y2X3 702 aaPredicted RBP7.03□□□□□ -1.28
USP48-211ENST00000526044 SLC7A3Q8WY07 619 aa7.03□□□□□ -1.28
USP48-211ENST00000526044 CARD10Q9BWT7 1032 aa7.03□□□□□ -1.28
USP48-211ENST00000526044 KRTAP9-9Q9BYP9 154 aa7.03□□□□□ -1.28
USP48-211ENST00000526044 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
USP48-211ENST00000526044 ADAMTS12P58397 1594 aa7.03□□□□□ -1.28
USP48-211ENST00000526044 KIF21BO75037 1637 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 CHD1O14646 1710 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 TMEM238LA0A1B0GVL6 79 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 LDHBP07195 334 aaKnown RBP7.02□□□□□ -1.29
USP48-211ENST00000526044 ESRRAP11474 423 aaPredicted RBP7.02□□□□□ -1.29
USP48-211ENST00000526044 ERCC3P19447 782 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 ITPKAP23677 461 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 FGD1P98174 961 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 C19orf57Q0VDD7 668 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 PI16Q6UXB8 463 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 KLHDC7BQ96G42 594 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 MRPL18Q9H0U6 180 aaKnown RBP7.02□□□□□ -1.29
USP48-211ENST00000526044 CLEC4MQ9H2X3 399 aaPredicted RBP7.02□□□□□ -1.29
USP48-211ENST00000526044 PCMTD2Q9NV79 361 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 WWC3Q9ULE0 1092 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 GRIN2AQ12879 1464 aa7.02□□□□□ -1.29
USP48-211ENST00000526044 GOLGA3Q08378 1498 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 TM4SF5O14894 197 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
USP48-211ENST00000526044 PTPN12Q05209 780 aaKnown RBP7.01□□□□□ -1.29
USP48-211ENST00000526044 PCDH1Q08174 1060 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 EAPPQ56P03 285 aaPredicted RBP7.01□□□□□ -1.29
USP48-211ENST00000526044 TMEM130Q8N3G9 435 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 GLIS3Q8NEA6 775 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 BCO2Q9BYV7 579 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 SOX17Q9H6I2 414 aaPredicted RBP7.01□□□□□ -1.29
USP48-211ENST00000526044 ZFYVE1Q9HBF4 777 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 ABCB6Q9NP58 842 aa7.01□□□□□ -1.29
USP48-211ENST00000526044 GIPC1O14908 333 aa7□□□□□ -1.29
USP48-211ENST00000526044 COBLO75128 1261 aa7□□□□□ -1.29
USP48-211ENST00000526044 NPAS4Q8IUM7 802 aa7□□□□□ -1.29
USP48-211ENST00000526044 SETDB2Q96T68 719 aa7□□□□□ -1.29
USP48-211ENST00000526044 XRCC5P13010 732 aaKnown RBP6.99□□□□□ -1.29
USP48-211ENST00000526044 RANGAP1P46060 587 aaPredicted RBP6.99□□□□□ -1.29
USP48-211ENST00000526044 FCGRTP55899 365 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 DUOXA2Q1HG44 320 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 ZNF423Q2M1K9 1284 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 RPS26P11Q5JNZ5 115 aaPredicted RBP6.99□□□□□ -1.29
USP48-211ENST00000526044 TMCO4Q5TGY1 634 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 HGSNATQ68CP4 663 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 NXPE4Q6UWF7 544 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 DTHD1Q6ZMT9 781 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 FRMD6Q96NE9 622 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
USP48-211ENST00000526044 SRCIN1Q9C0H9 1055 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 ZNF576Q9H609 170 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 AKTIPQ9H8T0 292 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 KCNK4Q9NYG8 393 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 SPG7Q9UQ90 795 aa6.99□□□□□ -1.29
USP48-211ENST00000526044 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
USP48-211ENST00000526044 DDX3YO15523 660 aaKnown RBP6.98□□□□□ -1.29
USP48-211ENST00000526044 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms