RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 TRIM42Q8IWZ5 723 aa9.86□□□□□ -0.83
COPB1-203ENST00000525214 ASB16Q96NS5 453 aa9.86□□□□□ -0.83
COPB1-203ENST00000525214 TRAK1Q9UPV9 953 aa9.86□□□□□ -0.83
COPB1-203ENST00000525214 SCO2A0A1W2PP80 73 aa9.85□□□□□ -0.83
COPB1-203ENST00000525214 HMX2A2RU54 273 aa9.85□□□□□ -0.83
COPB1-203ENST00000525214 EXOSC6Q5RKV6 272 aaKnown RBP9.85□□□□□ -0.83
COPB1-203ENST00000525214 RNF112Q9ULX5 631 aa9.85□□□□□ -0.83
COPB1-203ENST00000525214 EIF4EBP3O60516 100 aaPredicted RBP9.84□□□□□ -0.83
COPB1-203ENST00000525214 IGLV1-40P01703 118 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 CYP11A1P05108 521 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 DRD2P14416 443 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 POU4F3Q15319 338 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 RPS26P11Q5JNZ5 115 aaPredicted RBP9.84□□□□□ -0.83
COPB1-203ENST00000525214 ARTNQ5T4W7 220 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 SLC51AQ86UW1 340 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 C12orf50Q8NA57 414 aaPredicted RBP9.84□□□□□ -0.83
COPB1-203ENST00000525214 SETDB2Q96T68 719 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 BCO2Q9BYV7 579 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 CYP4F12Q9HCS2 524 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 NLRP2Q9NX02 1062 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 HIF3AQ9Y2N7 669 aa9.84□□□□□ -0.83
COPB1-203ENST00000525214 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.83□□□□□ -0.84
COPB1-203ENST00000525214 SGO2Q562F6 1265 aa9.83□□□□□ -0.84
COPB1-203ENST00000525214 BEND4Q6ZU67 534 aa9.83□□□□□ -0.84
COPB1-203ENST00000525214 CLEC10AQ8IUN9 316 aa9.83□□□□□ -0.84
COPB1-203ENST00000525214 FAM83CQ9BQN1 747 aa9.83□□□□□ -0.84
COPB1-203ENST00000525214 GAS2O43903 313 aaKnown RBP9.82□□□□□ -0.84
COPB1-203ENST00000525214 ZNF157P51786 506 aaPredicted RBP9.82□□□□□ -0.84
COPB1-203ENST00000525214 FCGRTP55899 365 aa9.82□□□□□ -0.84
COPB1-203ENST00000525214 NFIAQ12857 509 aa9.82□□□□□ -0.84
COPB1-203ENST00000525214 ZSCAN29Q8IWY8 852 aaPredicted RBP9.82□□□□□ -0.84
COPB1-203ENST00000525214 C2CD4AQ8NCU7 369 aaPredicted RBP9.82□□□□□ -0.84
COPB1-203ENST00000525214 GSC2O15499 205 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 MAPK8P45983 427 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 SOX4Q06945 474 aaPredicted RBP9.81□□□□□ -0.84
COPB1-203ENST00000525214 LRP8Q14114 963 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 NXPE4Q6UWF7 544 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 DTHD1Q6ZMT9 781 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 KCNF1Q9H3M0 494 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 WWC3Q9ULE0 1092 aa9.81□□□□□ -0.84
COPB1-203ENST00000525214 ADH5P11766 374 aa9.8□□□□□ -0.84
COPB1-203ENST00000525214 MAP4P27816 1152 aaKnown RBP9.8□□□□□ -0.84
COPB1-203ENST00000525214 ZDHHC13Q8IUH4 622 aa9.8□□□□□ -0.84
COPB1-203ENST00000525214 CORO1BQ9BR76 489 aa9.8□□□□□ -0.84
COPB1-203ENST00000525214 ZFP64Q9NPA5 681 aa9.8□□□□□ -0.84
COPB1-203ENST00000525214 PATL2C9JE40 543 aaKnown RBP9.79□□□□□ -0.84
COPB1-203ENST00000525214 HYAL3O43820 417 aaPredicted RBP9.79□□□□□ -0.84
COPB1-203ENST00000525214 CDPF1Q6NVV7 123 aa9.79□□□□□ -0.84
COPB1-203ENST00000525214 C3orf58Q8NDZ4 430 aa9.79□□□□□ -0.84
COPB1-203ENST00000525214 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
COPB1-203ENST00000525214 AP3B2Q13367 1082 aa9.78□□□□□ -0.84
COPB1-203ENST00000525214 FBF1Q8TES7 1133 aa9.78□□□□□ -0.84
COPB1-203ENST00000525214 DBNDD2Q9BQY9 259 aa9.78□□□□□ -0.84
COPB1-203ENST00000525214 TGFB1P01137 390 aa9.77□□□□□ -0.85
COPB1-203ENST00000525214 P4HBP07237 508 aaKnown RBP9.77□□□□□ -0.85
COPB1-203ENST00000525214 FBLIM1Q8WUP2 373 aa9.77□□□□□ -0.85
COPB1-203ENST00000525214 OSBPL7Q9BZF2 842 aa9.77□□□□□ -0.85
COPB1-203ENST00000525214 ACTL7BQ9Y614 415 aa9.77□□□□□ -0.85
COPB1-203ENST00000525214 XRCC5P13010 732 aaKnown RBP9.76□□□□□ -0.85
COPB1-203ENST00000525214 AKAP4Q5JQC9 854 aa9.76□□□□□ -0.85
COPB1-203ENST00000525214 HP1BP3Q5SSJ5 553 aaPredicted RBP9.76□□□□□ -0.85
COPB1-203ENST00000525214 WDR18Q9BV38 432 aa9.76□□□□□ -0.85
COPB1-203ENST00000525214 ZFYVE1Q9HBF4 777 aa9.76□□□□□ -0.85
COPB1-203ENST00000525214 AOC2O75106 756 aa9.75□□□□□ -0.85
COPB1-203ENST00000525214 RXRBP28702 533 aa9.75□□□□□ -0.85
COPB1-203ENST00000525214 AEBP1Q8IUX7 1158 aa9.75□□□□□ -0.85
COPB1-203ENST00000525214 SHKBP1Q8TBC3 707 aa9.75□□□□□ -0.85
COPB1-203ENST00000525214 EZH1Q92800 747 aaPredicted RBP9.75□□□□□ -0.85
COPB1-203ENST00000525214 WDR89Q96FK6 387 aaPredicted RBP9.75□□□□□ -0.85
COPB1-203ENST00000525214 CCDC86Q9H6F5 360 aaKnown RBP9.75□□□□□ -0.85
COPB1-203ENST00000525214 PPP4R2Q9NY27 417 aa9.75□□□□□ -0.85
COPB1-203ENST00000525214 GPN3Q9UHW5 284 aaPredicted RBP9.75□□□□□ -0.85
COPB1-203ENST00000525214 PRR19A6NJB7 356 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 MED26O95402 600 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
COPB1-203ENST00000525214 CD97P48960 835 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 USP11P51784 963 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 PDE3AQ14432 1141 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 ALG1LQ6GMV1 187 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 SND1Q7KZF4 910 aaKnown RBP eCLIP9.74□□□□□ -0.852e-6■■□□□ 12.7
COPB1-203ENST00000525214 PDZD3Q86UT5 571 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 SHISA5Q8N114 240 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 STK35Q8TDR2 534 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 GSX1Q9H4S2 264 aaPredicted RBP9.74□□□□□ -0.85
COPB1-203ENST00000525214 TMEM39AQ9NV64 488 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 AKAP2Q9Y2D5 859 aa9.74□□□□□ -0.85
COPB1-203ENST00000525214 FAM95CA0A1B0GW59 222 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 LIG1P18858 919 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 SSTR4P31391 388 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 MFSD14AQ96MC6 490 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 ZC3H12CQ9C0D7 883 aaKnown RBP9.73□□□□□ -0.85
COPB1-203ENST00000525214 RAD18Q9NS91 495 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 PPP1R9AQ9ULJ8 1098 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 AP4E1Q9UPM8 1137 aa9.73□□□□□ -0.85
COPB1-203ENST00000525214 ZNF862O60290 1169 aa9.72□□□□□ -0.85
COPB1-203ENST00000525214 GSTP1P09211 210 aaKnown RBP9.72□□□□□ -0.85
COPB1-203ENST00000525214 DYMQ7RTS9 669 aa9.72□□□□□ -0.85
COPB1-203ENST00000525214 SYNGAP1Q96PV0 1343 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms