RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 SENP2Q9HC62 589 aa12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SNW1Q13573 536 aaKnown RBP12.58□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SASS6Q6UVJ0 657 aa12.58□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SPATA5Q8NB90 893 aa12.58□□□□□ -0.39
RAB11FIP1-204ENST00000522774 C8orf76Q96K31 380 aa12.58□□□□□ -0.39
RAB11FIP1-204ENST00000522774 STRBPQ96SI9 672 aaKnown RBP12.58□□□□□ -0.39
RAB11FIP1-204ENST00000522774 INCENPQ9NQS7 918 aa12.58□□□□□ -0.39
RAB11FIP1-204ENST00000522774 C4AP0C0L4 1744 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 WDR19Q8NEZ3 1342 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 SLC5A1P13866 664 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 EPB41L4AQ9HCS5 686 aaPredicted RBP12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PHLPP1O60346 1717 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NRAPQ86VF7 1730 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NEDD4P46934 1319 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 B4E1Z4 1266 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CPLX1O14810 134 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 POLR3DP05423 398 aaPredicted RBP12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 RXRAP19793 462 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 TRDNQ13061 729 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ATL3Q6DD88 541 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 AIDAQ96BJ3 306 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 AK7Q96M32 723 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
RAB11FIP1-204ENST00000522774 DHX16O60231 1041 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 TPM2P07951 284 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ME1P48163 572 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MAGEB6Q8N7X4 407 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ENGASEQ8NFI3 743 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 FBXO18Q8NFZ0 1043 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 KCNF1Q9H3M0 494 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ANGEL1Q9UNK9 670 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 COL4A1P02462 1669 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 A0A087WWV3 80 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 KIF28PB7ZC32 967 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MBD4O95243 580 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NTSR2O95665 410 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ZNF165P49910 485 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 FSIP1Q8NA03 581 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PIBF1Q8WXW3 757 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PCDHA7Q9UN72 937 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NIP7Q9Y221 180 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CLIC4Q9Y696 253 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 TACC3Q9Y6A5 838 aa12.57□□□□□ -0.4
RAB11FIP1-204ENST00000522774 BCAMP50895 628 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 AIFM3Q96NN9 605 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 RTEL1Q9NZ71 1219 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 DOCK2Q92608 1830 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CCDC73Q6ZRK6 1079 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 C11orf57Q6ZUT1 292 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ZMYM6O95789 1325 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 RREB1Q92766 1687 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CDC27P30260 824 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CTDSPL2Q05D32 466 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 LINC00301Q8NCQ3 95 aa12.56□□□□□ -0.4
RAB11FIP1-204ENST00000522774 KCNQ2O43526 872 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CCDC152Q4G0S7 254 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PARP10Q53GL7 1025 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 APOA5Q6Q788 366 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CCDC144CPQ8IYA2 1237 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ERCC4Q92889 916 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PRKAB2O43741 272 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NOLC1Q14978 699 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MYSM1Q5VVJ2 828 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MICU3Q86XE3 530 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
RAB11FIP1-204ENST00000522774 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PATL2C9JE40 543 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 TERF1P54274 439 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 ALX1Q15699 326 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MYL10Q9BUA6 226 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 STK38Q15208 465 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 FMR1NBQ8N0W7 255 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 PHKBQ93100 1093 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 NAPBQ9H115 298 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 SPATA31A5Q5VU36 1347 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 SPATA31A7Q8IWB4 1347 aa12.54□□□□□ -0.4
RAB11FIP1-204ENST00000522774 GSG1L2A8MUP6 293 aa12.53□□□□□ -0.4
RAB11FIP1-204ENST00000522774 CTAGE5O15320 804 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms