RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 PRPF40BQ6NWY9 871 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 ZNF511Q8NB15 262 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 ZIC5Q96T25 663 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 ZNF277Q9NRM2 450 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 PLA2G2EQ9NZK7 142 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 COL6A3P12111 3177 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 COL15A1P39059 1388 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 TRPA1O75762 1119 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 ATP2B4P23634 1241 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 SERPINB4P48594 390 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 AKAP4Q5JQC9 854 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 NYAP1Q6ZVC0 841 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 C1QTNF2Q9BXJ5 285 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 IL21Q9HBE4 155 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 FCF1Q9Y324 198 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 ROCK2O75116 1388 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 INSRP06213 1382 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 FLT4P35916 1363 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 RAB3GAP2Q9H2M9 1393 aa6.91□□□□□ -1.3
CTNNA1-232ENST00000522013 SCN7AQ01118 1682 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 RBBP6Q7Z6E9 1792 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 PTPN5P54829 565 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 CABP4P57796 275 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 GTF2IP78347 998 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 CCDC93Q567U6 631 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 GPC2Q8N158 579 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 SIX5Q8N196 739 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 SYNE4Q8N205 404 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 CCER1Q8TC90 406 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 HDAC9Q9UKV0 1011 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 NOD1Q9Y239 953 aa6.9□□□□□ -1.3
CTNNA1-232ENST00000522013 PPM1GO15355 546 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 LGR5O75473 907 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 EPS15P42566 896 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 FKBP4Q02790 459 aaKnown RBP eCLIP6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 AGERQ15109 404 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 NOM1Q5C9Z4 860 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 INTS5Q6P9B9 1019 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 BPHLQ86WA6 291 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 TRIM50Q86XT4 487 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 HHIPL1Q96JK4 782 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 RNF186Q9NXI6 227 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 SAGE1Q9NXZ1 904 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 NARFQ9UHQ1 456 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 PDZRN3Q9UPQ7 1066 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 PCDHGA11Q9Y5H2 935 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 SOS1Q07889 1333 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 CENPFP49454 3210 aa6.89□□□□□ -1.31
CTNNA1-232ENST00000522013 PITPNM2Q9BZ72 1349 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 SFI1A8K8P3 1242 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 ESPNB1AK53 854 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 ERVV-2B6SEH9 535 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 FZD9O00144 591 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 PRMT3O60678 531 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 ARID4AP29374 1257 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 IARSP41252 1262 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 ATP1A2P50993 1020 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 HUNKP57058 714 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 OCLNQ16625 522 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 LARGE2Q8N3Y3 721 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 JDP2Q8WYK2 163 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 SLC10A4Q96EP9 437 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 BRIP1Q9BX63 1249 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 GLIS2Q9BZE0 524 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 GGNBP2Q9H3C7 697 aa6.88□□□□□ -1.31
CTNNA1-232ENST00000522013 SOWAHDA6NJG2 315 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 SCNN1DP51172 638 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 SH3BP2P78314 561 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 ST5P78524 1137 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 PKN2Q16513 984 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 CCDC102BQ68D86 513 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 STYK1Q6J9G0 422 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 PRR5LQ6MZQ0 368 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 OLFM4Q6UX06 510 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 USP50Q70EL3 339 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 DNAJC10Q8IXB1 793 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 TPCN2Q8NHX9 752 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 MASTLQ96GX5 879 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 PCDHB11Q9Y5F2 797 aa6.87□□□□□ -1.31
CTNNA1-232ENST00000522013 NCAPD2Q15021 1401 aa6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 PPEF1O14829 653 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 HSP90AB1P08238 724 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 KIF23Q02241 960 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 TBC1D9BQ66K14 1250 aa6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 DNAJC14Q6Y2X3 702 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 CNBD1Q8NA66 436 aa6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 ZBTB1Q9Y2K1 713 aa6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 EMILIN1Q9Y6C2 1016 aa6.86□□□□□ -1.31
CTNNA1-232ENST00000522013 TONSLQ96HA7 1378 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 COL4A5P29400 1685 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 SRGNP10124 158 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 ZNF157P51786 506 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 SEC13P55735 322 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 RAB15P59190 212 aa6.85□□□□□ -1.31
CTNNA1-232ENST00000522013 PLA2G2CQ5R387 149 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms