RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NEK1Q96PY6 1258 aa17.93■□□□□ 0.46
TRAPPC9-205ENST00000518839 COA1Q9GZY4 146 aa17.93■□□□□ 0.46
TRAPPC9-205ENST00000518839 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC9-205ENST00000518839 CHD4Q14839 1912 aa17.92■□□□□ 0.46
TRAPPC9-205ENST00000518839 PATL2C9JE40 543 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-205ENST00000518839 GSTO1P78417 241 aa17.92■□□□□ 0.46
TRAPPC9-205ENST00000518839 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
TRAPPC9-205ENST00000518839 NACAP1Q9BZK3 213 aa17.92■□□□□ 0.46
TRAPPC9-205ENST00000518839 ZC3H12CQ9C0D7 883 aaKnown RBP17.92■□□□□ 0.46
TRAPPC9-205ENST00000518839 SLKQ9H2G2 1235 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-205ENST00000518839 MAGEB6P1A0A0J9YX57 407 aa17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 FGAP02671 866 aa17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 RPS6KB1P23443 525 aa17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 POLD1P28340 1107 aa17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 NSUN4Q96CB9 384 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 TMX3Q96JJ7 454 aa17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 ZSCAN31Q96LW9 406 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 CWC22Q9HCG8 908 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 CHMP5Q9NZZ3 219 aa17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 LIMCH1Q9UPQ0 1083 aa17.91■□□□□ 0.46
TRAPPC9-205ENST00000518839 ZNF213O14771 459 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 FOXP2O15409 715 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 APPP05067 770 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 LDHBP07195 334 aaKnown RBP17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 AK2P54819 239 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 CUL4AQ13619 759 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 DZIP1Q86YF9 867 aaKnown RBP17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 CERS3Q8IU89 383 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 INTS4Q96HW7 963 aaKnown RBP17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 MTFR1LQ9H019 292 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 FAM205AQ6ZU69 1335 aa17.9■□□□□ 0.46
TRAPPC9-205ENST00000518839 LDHCP07864 332 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 CHRNA5P30532 468 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 MECOMQ03112 1051 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 SLC51AQ86UW1 340 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 SPRYD3Q8NCJ5 442 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 GPR101Q96P66 508 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 NAPBQ9H115 298 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 ARMT1Q9H993 441 aa17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC9-205ENST00000518839 E7EWF7 191 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 SLF2Q8IX21 1173 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 IFNL3Q8IZI9 196 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 LCORLQ8N3X6 602 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 RTFDC1Q9BY42 306 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 SLC4A4Q9Y6R1 1079 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 TIAM2Q8IVF5 1701 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 MYH2Q9UKX2 1941 aa17.88■□□□□ 0.45
TRAPPC9-205ENST00000518839 G3V3G9 751 aa17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 PRDX5P30044 214 aa17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 DDIT3P35638 169 aa17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 DCAF8Q5TAQ9 597 aa17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 GIMAP6Q6P9H5 292 aa17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 TTLL6Q8N841 843 aa17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
TRAPPC9-205ENST00000518839 GSG1L2A8MUP6 293 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 CPA1P15085 419 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 TDO2P48775 406 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 TGFB2P61812 414 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 TRDNQ13061 729 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 TTLL5Q6EMB2 1281 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 STOX1Q6ZVD7 989 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 MIGA1Q8NAN2 632 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 NCOA7Q8NI08 942 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 NOL10Q9BSC4 688 aaKnown RBP17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 TAF6LQ9Y6J9 622 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 WDR19Q8NEZ3 1342 aa17.86■□□□□ 0.45
TRAPPC9-205ENST00000518839 RIMBP2O15034 1052 aa17.85■□□□□ 0.45
TRAPPC9-205ENST00000518839 BAG3O95817 575 aa17.85■□□□□ 0.45
TRAPPC9-205ENST00000518839 PODNQ7Z5L7 613 aa17.85■□□□□ 0.45
TRAPPC9-205ENST00000518839 RALYLQ86SE5 291 aaKnown RBP17.85■□□□□ 0.45
TRAPPC9-205ENST00000518839 ADGRA1Q86SQ6 560 aa17.85■□□□□ 0.45
TRAPPC9-205ENST00000518839 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
TRAPPC9-205ENST00000518839 LAMB1P07942 1786 aa17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 SOGA3Q5TF21 947 aa17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 NOL8Q76FK4 1167 aaKnown RBP17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 FBXL16Q8N461 479 aa17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 ZNF384Q8TF68 577 aa17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 CHMP4CQ96CF2 233 aa17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 EPB41L4AQ9HCS5 686 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-205ENST00000518839 SNED1Q8TER0 1413 aa17.83■□□□□ 0.45
TRAPPC9-205ENST00000518839 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 MCM5P33992 734 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 HAND2P61296 217 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 NUCB2P80303 420 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 FGD1P98174 961 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 EXOSC10Q01780 885 aaKnown RBP17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 CCDC93Q567U6 631 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 MFSD14BQ5SR56 506 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 RTKN2Q8IZC4 609 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 RNF41Q9H4P4 317 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 CNNM2Q9H8M5 875 aa17.83■□□□□ 0.44
TRAPPC9-205ENST00000518839 ATP8A2Q9NTI2 1148 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms