RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 PIP4K2AP48426 406 aaPredicted RBP3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 TCIRG1Q13488 830 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 IRF5Q13568 498 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 PRKG1Q13976 671 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 POLA2Q14181 598 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 IER5LQ5T953 404 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 SUSD4Q5VX71 490 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 RSBN1LQ6PCB5 846 aaPredicted RBP3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 DPP8Q6V1X1 898 aaPredicted RBP3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 ZNF34Q8IZ26 560 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 PIP4P2Q8N4L2 257 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 CARD14Q9BXL6 1004 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 NBPF3Q9H094 633 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 ZNF576Q9H609 170 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 ZFYVE28Q9HCC9 887 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 ZCCHC17Q9NP64 241 aaKnown RBP3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 AOX1Q06278 1338 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 ATRNL1Q5VV63 1379 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 SMCHD1A6NHR9 2005 aa3.36□□□□□ -1.87
RNU1-48P-201ENST00000516400 USP9XQ93008 2570 aaPredicted RBP3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 PTPRSQ13332 1948 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 ATG2AQ2TAZ0 1938 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 BTBD19C9JJ37 291 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 KCNQ3O43525 872 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 ECE2O60344 883 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 INHAP05111 366 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 ELNP15502 786 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 TRIM32Q13049 653 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 PDE3AQ14432 1141 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 TAF1CQ15572 869 aaPredicted RBP3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 DOK7Q18PE1 504 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 MAP3K21Q5TCX8 1036 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 RASIP1Q5U651 963 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 LHX8Q68G74 356 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 OTUD7BQ6GQQ9 843 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 ZNF790Q6PG37 636 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 ARMC9Q7Z3E5 817 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 MTMR14Q8NCE2 650 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 SLAIN1Q8ND83 568 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 HELBQ8NG08 1087 aaPredicted RBP3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 TMC1Q8TDI8 760 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 RBM17Q96I25 401 aaKnown RBP3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 TEX13AQ9BXU3 409 aaPredicted RBP3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 C11orf49Q9H6J7 331 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 FANCMQ8IYD8 2048 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 MYPNQ86TC9 1320 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 A0A1B0GUL6 1792 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 IGSF10Q6WRI0 2623 aa3.35□□□□□ -1.87
RNU1-48P-201ENST00000516400 AKAP13Q12802 2813 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 COL12A1Q99715 3063 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 FAM177BA6PVY3 158 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 ADCY3O60266 1144 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 USP17L8P0C7I0 530 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 U2AF1L5P0DN76 240 aaPredicted RBP3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 DNAJB2P25686 324 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 FLT3LGP49771 235 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 UBXN2AP68543 259 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 U2AF1Q01081 240 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 ACAP1Q15027 740 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 WASHC4Q2M389 1173 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 NBPF12Q5TAG4 269 aaPredicted RBP3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 HFE2Q6ZVN8 426 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 ASCL5Q7RTU5 278 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 LRP10Q7Z4F1 713 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 PODNQ7Z5L7 613 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 IL17REQ8NFR9 667 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 OPTNQ96CV9 577 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 TEPSINQ96N21 525 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 PRDM12Q9H4Q4 367 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 GJD2Q9UKL4 321 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 DAGLAQ9Y4D2 1042 aa3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 EP300Q09472 2414 aaPredicted RBP3.34□□□□□ -1.87
RNU1-48P-201ENST00000516400 LAMA1P25391 3075 aa3.34□□□□□ -1.88
RNU1-48P-201ENST00000516400 KALRNO60229 2985 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 SPTBN2O15020 2390 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 CELSR3Q9NYQ7 3312 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 TEP1Q99973 2627 aaKnown RBP3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 CCL15-CCL14A0A0B4J2E2 113 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 ERVV-1B6SEH8 477 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 RIMBP2O15034 1052 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 GFRA3O60609 400 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 IGHA2P01877 340 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 PBX2P40425 430 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 GPSM2P81274 684 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 TTLL12Q14166 644 aaPredicted RBP3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 CCDC85BQ15834 202 aaPredicted RBP3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 CCL15Q16663 113 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 DACT2Q5SW24 774 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 GPAT2Q6NUI2 795 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 C16orf59Q7L2K0 433 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 SH3RF1Q7Z6J0 888 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 CDAN1Q8IWY9 1227 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 ANKRD13AQ8IZ07 590 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 TBC1D16Q8TBP0 767 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 RAET1EQ8TD07 263 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 PPM1EQ8WY54 764 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 RPGRQ92834 1020 aaKnown RBP3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 MXD3Q9BW11 206 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 PBX4Q9BYU1 374 aa3.33□□□□□ -1.88
RNU1-48P-201ENST00000516400 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms