RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 TRDNQ13061 729 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 ERFEQ4G0M1 354 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 C3orf67Q6ZVT6 689 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 NGLY1Q96IV0 654 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 CDC5LQ99459 802 aaKnown RBP9.62□□□□□ -0.87
CPNE4-211ENST00000514439 NUP62CLQ9H1M0 184 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 EPB41L4AQ9HCS5 686 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-211ENST00000514439 DACT1Q9NYF0 836 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 CFAP45Q9UL16 551 aa9.62□□□□□ -0.87
CPNE4-211ENST00000514439 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 PTF1AQ7RTS3 328 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 RAB11FIP4Q86YS3 637 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 BICD2Q8TD16 824 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 CNTNAP4Q9C0A0 1308 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 DOCK2Q92608 1830 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 DHX16O60231 1041 aaKnown RBP9.61□□□□□ -0.87
CPNE4-211ENST00000514439 CEBPZQ03701 1054 aaKnown RBP9.61□□□□□ -0.87
CPNE4-211ENST00000514439 ALX1Q15699 326 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 CAMK4Q16566 473 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 SMIM5Q71RC9 77 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 FTOQ9C0B1 505 aaKnown RBP eCLIP9.61□□□□□ -0.87
CPNE4-211ENST00000514439 ARMT1Q9H993 441 aa9.61□□□□□ -0.87
CPNE4-211ENST00000514439 DDX19AQ9NUU7 478 aaKnown RBP9.61□□□□□ -0.87
CPNE4-211ENST00000514439 ANGEL1Q9UNK9 670 aaKnown RBP9.61□□□□□ -0.87
CPNE4-211ENST00000514439 NEDD4P46934 1319 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 B4E1Z4 1266 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 SH2B2O14492 632 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-211ENST00000514439 CCDC192P0DO97 292 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 MAP3K11Q16584 847 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 BICDL1Q6ZP65 573 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-211ENST00000514439 ANKRD18AQ8IVF6 992 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 IFNL3Q8IZI9 196 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 USP25Q9UHP3 1055 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
CPNE4-211ENST00000514439 UBAP1LF5GYI3 381 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 CPLX1O14810 134 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 NR1I2O75469 434 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 MSNP26038 577 aaKnown RBP9.6□□□□□ -0.87
CPNE4-211ENST00000514439 SF3B3Q15393 1217 aaKnown RBP9.6□□□□□ -0.87
CPNE4-211ENST00000514439 USP28Q96RU2 1077 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 NAPBQ9H115 298 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 TNMDQ9H2S6 317 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 CLSTN2Q9H4D0 955 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
CPNE4-211ENST00000514439 ORC3Q9UBD5 711 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-211ENST00000514439 NOL7Q9UMY1 257 aaKnown RBP9.6□□□□□ -0.87
CPNE4-211ENST00000514439 SCN7AQ01118 1682 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 GSG1L2A8MUP6 293 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 OTUD7BQ6GQQ9 843 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 LCORLQ8N3X6 602 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 ZNF396Q96N95 335 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-211ENST00000514439 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.59□□□□□ -0.87
CPNE4-211ENST00000514439 CCDC39Q9UFE4 941 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 RCOR1Q9UKL0 485 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 IQSEC3Q9UPP2 1182 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-211ENST00000514439 ZNF804BA4D1E1 1349 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 PRKAB2O43741 272 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 TYRO3Q06418 890 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 RBM43Q6ZSC3 357 aaKnown RBP9.59□□□□□ -0.87
CPNE4-211ENST00000514439 CKAP2LQ8IYA6 745 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 C8orf76Q96K31 380 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 SENP2Q9HC62 589 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 BSDC1Q9NW68 430 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-211ENST00000514439 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
CPNE4-211ENST00000514439 PNPLA7Q6ZV29 1317 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 WTIPA6NIX2 430 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-211ENST00000514439 RGL2O15211 777 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 GTF2E1P29083 439 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-211ENST00000514439 GYG1P46976 350 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 METAP2P50579 478 aaKnown RBP eCLIP9.58□□□□□ -0.88
CPNE4-211ENST00000514439 APOA5Q6Q788 366 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 FNBP4Q8N3X1 1017 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-211ENST00000514439 MIGA1Q8NAN2 632 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 FBXO18Q8NFZ0 1043 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 IGDCC4Q8TDY8 1250 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 TMEM87BQ96K49 555 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 SRP68Q9UHB9 627 aaKnown RBP9.58□□□□□ -0.88
CPNE4-211ENST00000514439 TACC3Q9Y6A5 838 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 MRVI1Q9Y6F6 885 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 SLC4A4Q9Y6R1 1079 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
CPNE4-211ENST00000514439 COL1A1P02452 1464 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-211ENST00000514439 KDM4AO75164 1064 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 RPS6KA4O75676 772 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 ADCY5O95622 1261 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 GNAT2P19087 354 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 RXRAP19793 462 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
CPNE4-211ENST00000514439 MICU3Q86XE3 530 aa9.57□□□□□ -0.88
CPNE4-211ENST00000514439 CELF1Q92879 486 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms