RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 LAMB1P07942 1786 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 KDRP35968 1356 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 NUCB1Q02818 461 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 GOLGA1Q92805 767 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 ANKIB1Q9P2G1 1089 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 ZNF646O15015 1829 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 PCM1Q15154 2024 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 APBB1O00213 710 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 MCMDC2Q4G0Z9 681 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 RILPL1Q5EBL4 403 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC174Q6PII3 467 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC84Q86UT8 332 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 DDX21Q9NR30 783 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 ERICH4A6NGS2 130 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 SPECC1LQ69YQ0 1117 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 EXOC4Q96A65 974 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 RBM17Q96I25 401 aaKnown RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 TBC1D7Q9P0N9 293 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 BCAP29Q9UHQ4 241 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 EVPLQ92817 2033 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 PSMA7O14818 248 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 P4HA1P13674 534 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 C10orf76Q5T2E6 689 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 CTR9Q6PD62 1173 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 SPATA24Q86W54 205 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 CEP112Q8N8E3 955 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 NT5C3AQ9H0P0 336 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 NOC2LQ9Y3T9 749 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 COL14A1Q05707 1796 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 TRAPPC10P48553 1259 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 GIMAP6Q6P9H5 292 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 ARFGAP2Q8N6H7 521 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 NSRP1Q9H0G5 558 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 SERPINC1P01008 464 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 LMOD1P29536 600 aaPredicted RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 ALDH3A1P30838 453 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 SMTNP53814 917 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 SPATS2Q86XZ4 545 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 AFAP1L2Q8N4X5 818 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 RUBCNQ92622 972 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC77Q9BR77 488 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 SLC12A5Q9H2X9 1139 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 IVLP07476 585 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 GOPCQ9HD26 462 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 CIAO1O76071 339 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 HSPA8P11142 646 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC102BQ68D86 513 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 GIMAP8Q8ND71 665 aaPredicted RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 TSNARE1Q96NA8 513 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 KAT14Q9H8E8 782 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 DDX60Q8IY21 1712 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 ZMYM2Q9UBW7 1377 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 ACEP12821 1306 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 STX6O43752 255 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 RRP9O43818 475 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 TRAK2O60296 914 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 PUM3Q15397 648 aaKnown RBP5.6□□□□□ -1.51
PTPN13-209ENST00000511467 ARHGAP29Q52LW3 1261 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 CLEC4GQ6UXB4 293 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 DRC1Q96MC2 740 aa5.6□□□□□ -1.51
PTPN13-209ENST00000511467 ERVV-1B6SEH8 477 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 SMARCA5O60264 1052 aaPredicted RBP5.59□□□□□ -1.51
PTPN13-209ENST00000511467 UBA7P41226 1012 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CDC37Q16543 378 aaPredicted RBP5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CNGA4Q8IV77 575 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 PLBD2Q8NHP8 589 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC51Q96ER9 411 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 PPP1R12CQ9BZL4 782 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 GGNBP2Q9H3C7 697 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 PABPN1LA6NDY0 278 aaKnown RBP5.59□□□□□ -1.51
PTPN13-209ENST00000511467 SPDYE3A6NKU9 549 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 MAN1A1P33908 653 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 KYAT1Q16773 422 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 TMEM132AQ24JP5 1023 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 SRGAP1Q7Z6B7 1085 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 TRIM62Q9BVG3 475 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 MYOM1P52179 1685 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 PRC1O43663 620 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CDC42EP1Q00587 391 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 HS2ST1Q7LGA3 356 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 ANKS4BQ8N8V4 417 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CRACR2AQ9BSW2 395 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 USP6P35125 1406 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 GOLGA8CPA6NN73 597 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 MSH5O43196 834 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 POLR3DP05423 398 aaPredicted RBP5.59□□□□□ -1.51
PTPN13-209ENST00000511467 DDB1Q16531 1140 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC110Q8TBZ0 833 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 AS3MTQ9HBK9 375 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 NAP1L1P55209 391 aaKnown RBP5.59□□□□□ -1.51
PTPN13-209ENST00000511467 KLHL40Q2TBA0 621 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 C6orf163Q5TEZ5 329 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 SAMD3Q8N6K7 520 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC17Q96LX7 622 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 AK8Q96MA6 479 aa5.59□□□□□ -1.51
PTPN13-209ENST00000511467 HIRIP3Q9BW71 556 aaPredicted RBP5.59□□□□□ -1.51
PTPN13-209ENST00000511467 CARD10Q9BWT7 1032 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms