RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 ZSCAN12O43309 604 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 FANCCQ00597 558 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 MYL5Q02045 173 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 KIF23Q02241 960 aaPredicted RBP10.52□□□□□ -0.73
SNF8-210ENST00000511214 SLC39A6Q13433 755 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 DPCR1Q3MIW9 517 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 NFATC2IPQ8NCF5 419 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 CCDC191Q8NCU4 936 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 NCOA7Q8NI08 942 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 APPBP2Q92624 585 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 BCL11BQ9C0K0 894 aaPredicted RBP10.52□□□□□ -0.73
SNF8-210ENST00000511214 NCOA5Q9HCD5 579 aaKnown RBP10.52□□□□□ -0.73
SNF8-210ENST00000511214 TRMT1Q9NXH9 659 aaKnown RBP10.52□□□□□ -0.73
SNF8-210ENST00000511214 DNAI1Q9UI46 699 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 HPSEQ9Y251 543 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 AXIN2Q9Y2T1 843 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 NUP188Q5SRE5 1749 aa10.52□□□□□ -0.73
SNF8-210ENST00000511214 TJP1Q07157 1748 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 CPLX1O14810 134 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 PRC1O43663 620 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 PFKFB1P16118 471 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 NAA30Q147X3 362 aaPredicted RBP10.51□□□□□ -0.73
SNF8-210ENST00000511214 CCDC158Q5M9N0 1113 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 CPLX2Q6PUV4 134 aaKnown RBP10.51□□□□□ -0.73
SNF8-210ENST00000511214 KRT28Q7Z3Y7 464 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 NEUROD6Q96NK8 337 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 MPHOSPH8Q99549 860 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 HOOK1Q9UJC3 728 aaKnown RBP10.51□□□□□ -0.73
SNF8-210ENST00000511214 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 CLIC4Q9Y696 253 aa10.51□□□□□ -0.73
SNF8-210ENST00000511214 ATRNO75882 1429 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 COL18A1P39060 1754 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 MEGF6O75095 1541 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 KLF18A0A0U1RQI7 1052 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 A0A1B0GUL7 405 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 GOLGA8BA8MQT2 603 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 EFCAB8A8MWE9 144 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 M0R2C6 588 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 ARHGAP6O43182 974 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 CUTAO60888 179 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 SYKP43405 635 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 CT47A1Q5JQC4 288 aaPredicted RBP10.5□□□□□ -0.73
SNF8-210ENST00000511214 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 SYT10Q6XYQ8 523 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 RALYLQ86SE5 291 aaKnown RBP10.5□□□□□ -0.73
SNF8-210ENST00000511214 VSTM4Q8IW00 320 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.5□□□□□ -0.73
SNF8-210ENST00000511214 CALCOCO1Q9P1Z2 691 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 CEP126Q9P2H0 1117 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 ZMYM6O95789 1325 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 SETD1BQ9UPS6 1966 aaKnown RBP10.5□□□□□ -0.73
SNF8-210ENST00000511214 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 C4BP0C0L5 1744 aa10.5□□□□□ -0.73
SNF8-210ENST00000511214 ZRANB2O95218 330 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNF8-210ENST00000511214 FOSBP53539 338 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 UBASH3AP57075 661 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 TUBB4BP68371 445 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 GUCY1B3Q02153 619 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 RESP18Q5W5W9 173 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 UBXN4Q92575 508 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 OSBP2Q969R2 916 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 ZNF512BQ96KM6 892 aaPredicted RBP10.49□□□□□ -0.73
SNF8-210ENST00000511214 DACH1Q9UI36 760 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 NAP1L2Q9ULW6 460 aaPredicted RBP10.49□□□□□ -0.73
SNF8-210ENST00000511214 NDUFB9Q9Y6M9 179 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 STK36Q9NRP7 1315 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 NWD2Q9ULI1 1742 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 C1orf167Q5SNV9 1468 aa10.49□□□□□ -0.73
SNF8-210ENST00000511214 ADAMTSL3P82987 1691 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 UBR2Q8IWV8 1755 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 RGPD5Q99666 1765 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 ATP5J2-PTCD1G3V325 749 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 ZNF213O14771 459 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 PTCD1O75127 700 aaKnown RBP10.48□□□□□ -0.73
SNF8-210ENST00000511214 TADA3O75528 432 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 CHGBP05060 677 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TOP1P11387 765 aaKnown RBP10.48□□□□□ -0.73
SNF8-210ENST00000511214 CABP4P57796 275 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 ANTXR2P58335 489 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TIMM10P62072 90 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TRDNQ13061 729 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TRIM28Q13263 835 aaKnown RBP10.48□□□□□ -0.73
SNF8-210ENST00000511214 PTPAQ15257 358 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TEX35Q5T0J7 233 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 JAKMIP3Q5VZ66 844 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TRIM65Q6PJ69 517 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TMCO3Q6UWJ1 677 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 HOMER1Q86YM7 354 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TRIML1Q8N9V2 468 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 MNS1Q8NEH6 495 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 ORAI2Q96SN7 254 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 PLA2G12BQ9BX93 195 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.48□□□□□ -0.73
SNF8-210ENST00000511214 HSD3B7Q9H2F3 369 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 ZNF446Q9NWS9 450 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 FHOD1Q9Y613 1164 aa10.48□□□□□ -0.73
SNF8-210ENST00000511214 NID2Q14112 1375 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms