RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 RUSC1Q9BVN2 902 aa9.37□□□□□ -0.91
SSBP2-214ENST00000510060 ZFYVE1Q9HBF4 777 aa9.37□□□□□ -0.91
SSBP2-214ENST00000510060 PPP4R2Q9NY27 417 aa9.37□□□□□ -0.91
SSBP2-214ENST00000510060 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
SSBP2-214ENST00000510060 ITPKAP23677 461 aa9.36□□□□□ -0.91
SSBP2-214ENST00000510060 DSC3Q14574 896 aa9.36□□□□□ -0.91
SSBP2-214ENST00000510060 ASB16Q96NS5 453 aa9.36□□□□□ -0.91
SSBP2-214ENST00000510060 GSTM4Q03013 218 aa9.35□□□□□ -0.91
SSBP2-214ENST00000510060 SPRED3Q2MJR0 410 aa9.35□□□□□ -0.91
SSBP2-214ENST00000510060 PRR23CQ6ZRP0 262 aa9.35□□□□□ -0.91
SSBP2-214ENST00000510060 SLC51AQ86UW1 340 aa9.35□□□□□ -0.91
SSBP2-214ENST00000510060 USP26Q9BXU7 913 aa9.35□□□□□ -0.91
SSBP2-214ENST00000510060 TTBK1Q5TCY1 1321 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-214ENST00000510060 CHD1O14646 1710 aa9.34□□□□□ -0.91
SSBP2-214ENST00000510060 MEGF11A6BM72 1044 aa9.34□□□□□ -0.91
SSBP2-214ENST00000510060 DHX15O43143 795 aaKnown RBP9.34□□□□□ -0.91
SSBP2-214ENST00000510060 SART1O43290 800 aaKnown RBP9.34□□□□□ -0.91
SSBP2-214ENST00000510060 CYP11A1P05108 521 aa9.34□□□□□ -0.91
SSBP2-214ENST00000510060 ENOX2Q16206 610 aaKnown RBP9.34□□□□□ -0.91
SSBP2-214ENST00000510060 RPS26P11Q5JNZ5 115 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-214ENST00000510060 FDX2Q6P4F2 183 aa9.34□□□□□ -0.91
SSBP2-214ENST00000510060 FBF1Q8TES7 1133 aa9.34□□□□□ -0.91
SSBP2-214ENST00000510060 ZNF576Q9H609 170 aa9.34□□□□□ -0.91
SSBP2-214ENST00000510060 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
SSBP2-214ENST00000510060 PNMA6FA0A0J9YX94 578 aa9.33□□□□□ -0.92
SSBP2-214ENST00000510060 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
SSBP2-214ENST00000510060 XRCC5P13010 732 aaKnown RBP9.33□□□□□ -0.92
SSBP2-214ENST00000510060 PRSS36Q5K4E3 855 aa9.33□□□□□ -0.92
SSBP2-214ENST00000510060 HGSNATQ68CP4 663 aa9.33□□□□□ -0.92
SSBP2-214ENST00000510060 UTP4Q969X6 686 aaKnown RBP9.33□□□□□ -0.92
SSBP2-214ENST00000510060 UBL7Q96S82 380 aaPredicted RBP9.33□□□□□ -0.92
SSBP2-214ENST00000510060 CYP4F12Q9HCS2 524 aa9.33□□□□□ -0.92
SSBP2-214ENST00000510060 ABCB6Q9NP58 842 aa9.33□□□□□ -0.92
SSBP2-214ENST00000510060 LOC100289279A0A1B0GTE1 492 aa9.32□□□□□ -0.92
SSBP2-214ENST00000510060 B3GALT4O96024 378 aa9.32□□□□□ -0.92
SSBP2-214ENST00000510060 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSBP2-214ENST00000510060 GRM2Q14416 872 aa9.32□□□□□ -0.92
SSBP2-214ENST00000510060 NUTM2GQ5VZR2 741 aa9.32□□□□□ -0.92
SSBP2-214ENST00000510060 AEBP1Q8IUX7 1158 aa9.32□□□□□ -0.92
SSBP2-214ENST00000510060 EPS8L3Q8TE67 593 aaKnown RBP9.32□□□□□ -0.92
SSBP2-214ENST00000510060 FAM46AQ96IP4 442 aaKnown RBP9.32□□□□□ -0.92
SSBP2-214ENST00000510060 HIF3AQ9Y2N7 669 aa9.32□□□□□ -0.92
SSBP2-214ENST00000510060 GSC2O15499 205 aa9.31□□□□□ -0.92
SSBP2-214ENST00000510060 ATP2B2Q01814 1243 aa9.31□□□□□ -0.92
SSBP2-214ENST00000510060 ZNF423Q2M1K9 1284 aa9.31□□□□□ -0.92
SSBP2-214ENST00000510060 SUGCTQ9HAC7 445 aa9.31□□□□□ -0.92
SSBP2-214ENST00000510060 RAXQ9Y2V3 346 aa9.31□□□□□ -0.92
SSBP2-214ENST00000510060 AQRO60306 1485 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSBP2-214ENST00000510060 CFTRP13569 1480 aa9.3□□□□□ -0.92
SSBP2-214ENST00000510060 ITGB7P26010 798 aa9.3□□□□□ -0.92
SSBP2-214ENST00000510060 MAPK8P45983 427 aa9.3□□□□□ -0.92
SSBP2-214ENST00000510060 HNRNPUQ00839 825 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSBP2-214ENST00000510060 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
SSBP2-214ENST00000510060 ALG1LQ6GMV1 187 aa9.3□□□□□ -0.92
SSBP2-214ENST00000510060 SND1Q7KZF4 910 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSBP2-214ENST00000510060 MYRFLQ96LU7 910 aa9.3□□□□□ -0.92
SSBP2-214ENST00000510060 TMPRSS13Q9BYE2 586 aa9.3□□□□□ -0.92
SSBP2-214ENST00000510060 GAS2O43903 313 aaKnown RBP9.29□□□□□ -0.92
SSBP2-214ENST00000510060 AP3B2Q13367 1082 aa9.29□□□□□ -0.92
SSBP2-214ENST00000510060 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
SSBP2-214ENST00000510060 DTHD1Q6ZMT9 781 aa9.29□□□□□ -0.92
SSBP2-214ENST00000510060 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.29□□□□□ -0.92
SSBP2-214ENST00000510060 SMG8Q8ND04 991 aaKnown RBP9.29□□□□□ -0.92
SSBP2-214ENST00000510060 FBXO41Q8TF61 875 aa9.29□□□□□ -0.92
SSBP2-214ENST00000510060 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
SSBP2-214ENST00000510060 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
SSBP2-214ENST00000510060 STOML1Q9UBI4 398 aa9.29□□□□□ -0.92
SSBP2-214ENST00000510060 POU4F3Q15319 338 aa9.28□□□□□ -0.92
SSBP2-214ENST00000510060 ARMC10Q8N2F6 343 aa9.28□□□□□ -0.92
SSBP2-214ENST00000510060 GLIS3Q8NEA6 775 aa9.28□□□□□ -0.92
SSBP2-214ENST00000510060 BCO2Q9BYV7 579 aa9.28□□□□□ -0.92
SSBP2-214ENST00000510060 NRSN2Q9GZP1 204 aa9.28□□□□□ -0.92
SSBP2-214ENST00000510060 EIF4G3O43432 1585 aaKnown RBP9.28□□□□□ -0.92
SSBP2-214ENST00000510060 GIPC1O14908 333 aa9.27□□□□□ -0.93
SSBP2-214ENST00000510060 PREPP48147 710 aa9.27□□□□□ -0.93
SSBP2-214ENST00000510060 FGD1P98174 961 aa9.27□□□□□ -0.93
SSBP2-214ENST00000510060 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.27□□□□□ -0.93
SSBP2-214ENST00000510060 FSTP19883 344 aa9.26□□□□□ -0.93
SSBP2-214ENST00000510060 MAOBP27338 520 aa9.26□□□□□ -0.93
SSBP2-214ENST00000510060 FCGRTP55899 365 aa9.26□□□□□ -0.93
SSBP2-214ENST00000510060 PPP2R3AQ06190 1150 aa9.26□□□□□ -0.93
SSBP2-214ENST00000510060 FAM20CQ8IXL6 584 aa9.26□□□□□ -0.93
SSBP2-214ENST00000510060 C12orf50Q8NA57 414 aaPredicted RBP9.26□□□□□ -0.93
SSBP2-214ENST00000510060 TIAF1O95411 115 aa9.25□□□□□ -0.93
SSBP2-214ENST00000510060 COL19A1Q14993 1142 aa9.25□□□□□ -0.93
SSBP2-214ENST00000510060 PI16Q6UXB8 463 aa9.25□□□□□ -0.93
SSBP2-214ENST00000510060 CLEC10AQ8IUN9 316 aa9.25□□□□□ -0.93
SSBP2-214ENST00000510060 SPG7Q9UQ90 795 aa9.25□□□□□ -0.93
SSBP2-214ENST00000510060 GAPVD1Q14C86 1478 aa9.24□□□□□ -0.93
SSBP2-214ENST00000510060 BMP3P12645 472 aa9.24□□□□□ -0.93
SSBP2-214ENST00000510060 GSTT1P30711 240 aa9.24□□□□□ -0.93
SSBP2-214ENST00000510060 FRMD6Q96NE9 622 aa9.24□□□□□ -0.93
SSBP2-214ENST00000510060 TRIM56Q9BRZ2 755 aaKnown RBP9.24□□□□□ -0.93
SSBP2-214ENST00000510060 YIPF2Q9BWQ6 316 aa9.24□□□□□ -0.93
SSBP2-214ENST00000510060 LMTK3Q96Q04 1460 aa9.23□□□□□ -0.93
SSBP2-214ENST00000510060 NXPE4Q6UWF7 544 aa9.23□□□□□ -0.93
SSBP2-214ENST00000510060 KCNF1Q9H3M0 494 aa9.23□□□□□ -0.93
SSBP2-214ENST00000510060 RAD18Q9NS91 495 aa9.23□□□□□ -0.93
SSBP2-214ENST00000510060 TMEM39AQ9NV64 488 aa9.23□□□□□ -0.93
SSBP2-214ENST00000510060 GPN3Q9UHW5 284 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms