RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
SSBP2-214ENST00000510060 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
SSBP2-214ENST00000510060 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
SSBP2-214ENST00000510060 PHF23Q9BUL5 403 aaPredicted RBP25.63■■□□□ 1.69
SSBP2-214ENST00000510060 FOXD1Q16676 465 aa23.8■■□□□ 1.4
SSBP2-214ENST00000510060 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
SSBP2-214ENST00000510060 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
SSBP2-214ENST00000510060 ADRA2BP18089 450 aa22.66■■□□□ 1.22
SSBP2-214ENST00000510060 PIAS4Q8N2W9 510 aaPredicted RBP22.45■■□□□ 1.18
SSBP2-214ENST00000510060 MSH5O43196 834 aa22.17■■□□□ 1.14
SSBP2-214ENST00000510060 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
SSBP2-214ENST00000510060 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
SSBP2-214ENST00000510060 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
SSBP2-214ENST00000510060 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
SSBP2-214ENST00000510060 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
SSBP2-214ENST00000510060 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
SSBP2-214ENST00000510060 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
SSBP2-214ENST00000510060 KCNA4P22459 653 aa20.07■□□□□ 0.8
SSBP2-214ENST00000510060 RNF216Q9NWF9 866 aaPredicted RBP20.01■□□□□ 0.79
SSBP2-214ENST00000510060 HOXD11P31277 338 aaPredicted RBP19.96■□□□□ 0.79
SSBP2-214ENST00000510060 NPM3O75607 178 aaKnown RBP19.92■□□□□ 0.78
SSBP2-214ENST00000510060 DCAF8L1A6NGE4 600 aa19.59■□□□□ 0.73
SSBP2-214ENST00000510060 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
SSBP2-214ENST00000510060 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
SSBP2-214ENST00000510060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
SSBP2-214ENST00000510060 RNF39Q9H2S5 420 aa18.9■□□□□ 0.62
SSBP2-214ENST00000510060 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
SSBP2-214ENST00000510060 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
SSBP2-214ENST00000510060 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
SSBP2-214ENST00000510060 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
SSBP2-214ENST00000510060 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
SSBP2-214ENST00000510060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
SSBP2-214ENST00000510060 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
SSBP2-214ENST00000510060 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
SSBP2-214ENST00000510060 APLP2Q06481 763 aa18.42■□□□□ 0.54
SSBP2-214ENST00000510060 ZBTB22O15209 634 aa18.41■□□□□ 0.54
SSBP2-214ENST00000510060 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
SSBP2-214ENST00000510060 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
SSBP2-214ENST00000510060 CAPN15O75808 1086 aa18.17■□□□□ 0.5
SSBP2-214ENST00000510060 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
SSBP2-214ENST00000510060 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
SSBP2-214ENST00000510060 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
SSBP2-214ENST00000510060 ATXN8OSP0DMR3 200 aa18.05■□□□□ 0.48
SSBP2-214ENST00000510060 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
SSBP2-214ENST00000510060 DSG3P32926 999 aa17.89■□□□□ 0.45
SSBP2-214ENST00000510060 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
SSBP2-214ENST00000510060 ABCB7O75027 752 aa17.75■□□□□ 0.43
SSBP2-214ENST00000510060 POLA2Q14181 598 aa17.67■□□□□ 0.42
SSBP2-214ENST00000510060 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
SSBP2-214ENST00000510060 FBLN2P98095 1184 aa17.32■□□□□ 0.36
SSBP2-214ENST00000510060 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
SSBP2-214ENST00000510060 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
SSBP2-214ENST00000510060 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
SSBP2-214ENST00000510060 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
SSBP2-214ENST00000510060 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
SSBP2-214ENST00000510060 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
SSBP2-214ENST00000510060 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
SSBP2-214ENST00000510060 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
SSBP2-214ENST00000510060 SSUH2Q9Y2M2 353 aa16.76■□□□□ 0.27
SSBP2-214ENST00000510060 SPDYE4A6NLX3 237 aa16.7■□□□□ 0.26
SSBP2-214ENST00000510060 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
SSBP2-214ENST00000510060 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
SSBP2-214ENST00000510060 SPDYE1Q8NFV5 336 aaPredicted RBP16.53■□□□□ 0.24
SSBP2-214ENST00000510060 FKBP8Q14318 412 aa16.49■□□□□ 0.23
SSBP2-214ENST00000510060 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
SSBP2-214ENST00000510060 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
SSBP2-214ENST00000510060 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
SSBP2-214ENST00000510060 PROM2Q8N271 834 aa16.38■□□□□ 0.21
SSBP2-214ENST00000510060 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
SSBP2-214ENST00000510060 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
SSBP2-214ENST00000510060 FXR2P51116 673 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSBP2-214ENST00000510060 POTEHQ6S545 545 aa16.18■□□□□ 0.18
SSBP2-214ENST00000510060 PIP4P2Q8N4L2 257 aa16.17■□□□□ 0.18
SSBP2-214ENST00000510060 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
SSBP2-214ENST00000510060 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
SSBP2-214ENST00000510060 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
SSBP2-214ENST00000510060 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
SSBP2-214ENST00000510060 CREBZFQ9NS37 354 aa15.92■□□□□ 0.14
SSBP2-214ENST00000510060 MIER1Q8N108 512 aa15.86■□□□□ 0.13
SSBP2-214ENST00000510060 PLCD3Q8N3E9 789 aa15.85■□□□□ 0.13
SSBP2-214ENST00000510060 FARP1Q9Y4F1 1045 aaPredicted RBP15.85■□□□□ 0.13
SSBP2-214ENST00000510060 VASPP50552 380 aaPredicted RBP15.79■□□□□ 0.12
SSBP2-214ENST00000510060 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
SSBP2-214ENST00000510060 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
SSBP2-214ENST00000510060 HAX1O00165 279 aa15.75■□□□□ 0.11
SSBP2-214ENST00000510060 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
SSBP2-214ENST00000510060 C19orf67A6NJJ6 358 aa15.66■□□□□ 0.1
SSBP2-214ENST00000510060 PAK3O75914 559 aaPredicted RBP15.6■□□□□ 0.09
SSBP2-214ENST00000510060 CD44P16070 742 aaKnown RBP15.6■□□□□ 0.09
SSBP2-214ENST00000510060 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
SSBP2-214ENST00000510060 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
SSBP2-214ENST00000510060 SP7Q8TDD2 431 aaPredicted RBP15.48■□□□□ 0.07
SSBP2-214ENST00000510060 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
SSBP2-214ENST00000510060 EVX2Q03828 476 aa15.46■□□□□ 0.07
SSBP2-214ENST00000510060 NUBP1P53384 320 aa15.44■□□□□ 0.06
SSBP2-214ENST00000510060 SPOCK2Q92563 424 aa15.43■□□□□ 0.06
SSBP2-214ENST00000510060 CLCN6P51797 869 aa15.42■□□□□ 0.06
SSBP2-214ENST00000510060 FAM212AQ96EL1 285 aa15.42■□□□□ 0.06
SSBP2-214ENST00000510060 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
SSBP2-214ENST00000510060 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms