RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 FAAP100Q0VG06 881 aa9.86□□□□□ -0.83
TOPBP1-206ENST00000508524 ZMYM1Q5SVZ6 1142 aa9.86□□□□□ -0.83
TOPBP1-206ENST00000508524 SMG8Q8ND04 991 aaKnown RBP9.86□□□□□ -0.83
TOPBP1-206ENST00000508524 CYP11A1P05108 521 aa9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 MAOBP27338 520 aa9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 FCGRTP55899 365 aa9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 EXOSC6Q5RKV6 272 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 NUTM2GQ5VZR2 741 aa9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 NXPE4Q6UWF7 544 aa9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 FBF1Q8TES7 1133 aa9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 WWC3Q9ULE0 1092 aa9.85□□□□□ -0.83
TOPBP1-206ENST00000508524 SART1O43290 800 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-206ENST00000508524 ECEL1O95672 775 aa9.84□□□□□ -0.83
TOPBP1-206ENST00000508524 P4HBP07237 508 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-206ENST00000508524 FSTP19883 344 aa9.84□□□□□ -0.83
TOPBP1-206ENST00000508524 POU4F3Q15319 338 aa9.84□□□□□ -0.83
TOPBP1-206ENST00000508524 DTHD1Q6ZMT9 781 aa9.83□□□□□ -0.84
TOPBP1-206ENST00000508524 FAM20CQ8IXL6 584 aa9.83□□□□□ -0.84
TOPBP1-206ENST00000508524 CYP4F12Q9HCS2 524 aa9.83□□□□□ -0.84
TOPBP1-206ENST00000508524 STOML1Q9UBI4 398 aa9.83□□□□□ -0.84
TOPBP1-206ENST00000508524 BMP3P12645 472 aa9.82□□□□□ -0.84
TOPBP1-206ENST00000508524 ZNF157P51786 506 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-206ENST00000508524 C12orf50Q8NA57 414 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-206ENST00000508524 DDX54Q8TDD1 881 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-206ENST00000508524 C7orf69Q9H7B7 122 aa9.82□□□□□ -0.84
TOPBP1-206ENST00000508524 XRCC5P13010 732 aaKnown RBP9.81□□□□□ -0.84
TOPBP1-206ENST00000508524 ALG1LQ6GMV1 187 aa9.81□□□□□ -0.84
TOPBP1-206ENST00000508524 TRIM42Q8IWZ5 723 aa9.81□□□□□ -0.84
TOPBP1-206ENST00000508524 Q8N3U1 123 aa9.81□□□□□ -0.84
TOPBP1-206ENST00000508524 C3orf58Q8NDZ4 430 aa9.81□□□□□ -0.84
TOPBP1-206ENST00000508524 CORO1BQ9BR76 489 aa9.81□□□□□ -0.84
TOPBP1-206ENST00000508524 HIF3AQ9Y2N7 669 aa9.81□□□□□ -0.84
TOPBP1-206ENST00000508524 HMX2A2RU54 273 aa9.8□□□□□ -0.84
TOPBP1-206ENST00000508524 GAS2O43903 313 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-206ENST00000508524 DRD2P14416 443 aa9.8□□□□□ -0.84
TOPBP1-206ENST00000508524 AP3B2Q13367 1082 aa9.8□□□□□ -0.84
TOPBP1-206ENST00000508524 OSBPL7Q9BZF2 842 aa9.8□□□□□ -0.84
TOPBP1-206ENST00000508524 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
TOPBP1-206ENST00000508524 ADH5P11766 374 aa9.79□□□□□ -0.84
TOPBP1-206ENST00000508524 SOX4Q06945 474 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-206ENST00000508524 SGO2Q562F6 1265 aa9.79□□□□□ -0.84
TOPBP1-206ENST00000508524 SLC51AQ86UW1 340 aa9.79□□□□□ -0.84
TOPBP1-206ENST00000508524 CLEC10AQ8IUN9 316 aa9.79□□□□□ -0.84
TOPBP1-206ENST00000508524 C2CD4AQ8NCU7 369 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-206ENST00000508524 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
TOPBP1-206ENST00000508524 IGLV1-40P01703 118 aa9.78□□□□□ -0.84
TOPBP1-206ENST00000508524 ATP2B2Q01814 1243 aa9.78□□□□□ -0.84
TOPBP1-206ENST00000508524 HP1BP3Q5SSJ5 553 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-206ENST00000508524 BEND4Q6ZU67 534 aa9.78□□□□□ -0.84
TOPBP1-206ENST00000508524 FAM83CQ9BQN1 747 aa9.78□□□□□ -0.84
TOPBP1-206ENST00000508524 GPN3Q9UHW5 284 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-206ENST00000508524 GSC2O15499 205 aa9.77□□□□□ -0.85
TOPBP1-206ENST00000508524 LDHBP07195 334 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-206ENST00000508524 MAP4P27816 1152 aaKnown RBP9.77□□□□□ -0.85
TOPBP1-206ENST00000508524 SRCIN1Q9C0H9 1055 aa9.77□□□□□ -0.85
TOPBP1-206ENST00000508524 KCNF1Q9H3M0 494 aa9.77□□□□□ -0.85
TOPBP1-206ENST00000508524 TMEM39AQ9NV64 488 aa9.77□□□□□ -0.85
TOPBP1-206ENST00000508524 AKAP2Q9Y2D5 859 aa9.77□□□□□ -0.85
TOPBP1-206ENST00000508524 ANKRD33BA6NCL7 494 aa9.76□□□□□ -0.85
TOPBP1-206ENST00000508524 NFIAQ12857 509 aa9.76□□□□□ -0.85
TOPBP1-206ENST00000508524 RNF43Q68DV7 783 aa9.76□□□□□ -0.85
TOPBP1-206ENST00000508524 RNF112Q9ULX5 631 aa9.76□□□□□ -0.85
TOPBP1-206ENST00000508524 GIPC1O14908 333 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 GSTT1P30711 240 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 PDE3AQ14432 1141 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 COL19A1Q14993 1142 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 CDPF1Q6NVV7 123 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 DNAJC14Q6Y2X3 702 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 PDZD3Q86UT5 571 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 WDR18Q9BV38 432 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 CCDC86Q9H6F5 360 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 ACTL7BQ9Y614 415 aa9.75□□□□□ -0.85
TOPBP1-206ENST00000508524 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 AOC2O75106 756 aa9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 PPP2R3AQ06190 1150 aa9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 AKAP4Q5JQC9 854 aa9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 STK35Q8TDR2 534 aa9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 C12orf49Q9H741 205 aa9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
TOPBP1-206ENST00000508524 ARTNQ5T4W7 220 aa9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 ZDHHC13Q8IUH4 622 aa9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 FBLIM1Q8WUP2 373 aa9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 DBNDD2Q9BQY9 259 aa9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 ZC3H12CQ9C0D7 883 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 RAD18Q9NS91 495 aa9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 PPM1HQ9ULR3 514 aa9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 SYNGAP1Q96PV0 1343 aa9.73□□□□□ -0.85
TOPBP1-206ENST00000508524 PRPF40AO75400 957 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 LIG1P18858 919 aa9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 RXRBP28702 533 aa9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 USP11P51784 963 aa9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 LRP8Q14114 963 aa9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 XP32Q5T750 250 aa9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 NPAS4Q8IUM7 802 aa9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 SULF2Q8IWU5 870 aa9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 EZH1Q92800 747 aaPredicted RBP9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 WDR89Q96FK6 387 aaPredicted RBP9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 NECAB3Q96P71 396 aaPredicted RBP9.72□□□□□ -0.85
TOPBP1-206ENST00000508524 GSX1Q9H4S2 264 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms