RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 CLN3Q13286 438 aa7.77□□□□□ -1.17
VEGFC-201ENST00000507638 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
VEGFC-201ENST00000507638 ZNF622Q969S3 477 aaKnown RBP eCLIP7.77□□□□□ -1.17
VEGFC-201ENST00000507638 CLUAP1Q96AJ1 413 aa7.77□□□□□ -1.17
VEGFC-201ENST00000507638 LTBP3Q9NS15 1303 aa7.77□□□□□ -1.17
VEGFC-201ENST00000507638 SOX1O00570 391 aaPredicted RBP7.76□□□□□ -1.17
VEGFC-201ENST00000507638 RNF144AP50876 292 aaPredicted RBP7.76□□□□□ -1.17
VEGFC-201ENST00000507638 HDGFL1Q5TGJ6 251 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 PLEKHM2Q8IWE5 1019 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 OSBPL3Q9H4L5 887 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 ZNF408Q9H9D4 720 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 POLMQ9NP87 494 aaPredicted RBP7.76□□□□□ -1.17
VEGFC-201ENST00000507638 NXF1Q9UBU9 619 aaKnown RBP7.76□□□□□ -1.17
VEGFC-201ENST00000507638 ASAP1Q9ULH1 1129 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 NOD1Q9Y239 953 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 STXBP5LQ9Y2K9 1186 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 ERBB4Q15303 1308 aa7.76□□□□□ -1.17
VEGFC-201ENST00000507638 SCN11AQ9UI33 1791 aa7.75□□□□□ -1.17
VEGFC-201ENST00000507638 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
VEGFC-201ENST00000507638 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
VEGFC-201ENST00000507638 INTS3Q68E01 1043 aaKnown RBP7.75□□□□□ -1.17
VEGFC-201ENST00000507638 ZNF296Q8WUU4 475 aaPredicted RBP7.75□□□□□ -1.17
VEGFC-201ENST00000507638 CSRNP1Q96S65 589 aa7.75□□□□□ -1.17
VEGFC-201ENST00000507638 AFDNP55196 1824 aaKnown RBP7.75□□□□□ -1.17
VEGFC-201ENST00000507638 LTN1O94822 1766 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 DLEC1Q9Y238 1755 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 FAM155AB1AL88 458 aaPredicted RBP7.74□□□□□ -1.17
VEGFC-201ENST00000507638 SKIP12755 728 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 EPS15P42566 896 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 SCTRP47872 440 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 ATP1A2P50993 1020 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 GLMNQ92990 594 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 CALR3Q96L12 384 aaKnown RBP7.74□□□□□ -1.17
VEGFC-201ENST00000507638 AGBL1Q96MI9 1066 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 RGPD2P0DJD1 1756 aa7.74□□□□□ -1.17
VEGFC-201ENST00000507638 INSRP06213 1382 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 A0A1W2PRU2 124 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 ATP9BO43861 1147 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 HUNKP57058 714 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 LYSMD3Q7Z3D4 306 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 DEFB123Q8N688 67 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 KDF1Q8NAX2 398 aaPredicted RBP7.73□□□□□ -1.17
VEGFC-201ENST00000507638 IP6K1Q92551 441 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 INSM2Q96T92 566 aaPredicted RBP7.73□□□□□ -1.17
VEGFC-201ENST00000507638 ESYT1Q9BSJ8 1104 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 ZMYND15Q9H091 742 aa7.73□□□□□ -1.17
VEGFC-201ENST00000507638 LAMB4A4D0S4 1761 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 MYH14Q7Z406 1995 aaKnown RBP7.72□□□□□ -1.17
VEGFC-201ENST00000507638 CACNA1AO00555 2505 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 USP17L5A8MUK1 530 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 TERTO14746 1132 aaKnown RBP7.72□□□□□ -1.17
VEGFC-201ENST00000507638 TBC1D8O95759 1140 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 SERPINB2P05120 415 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 LMOD1P29536 600 aaPredicted RBP7.72□□□□□ -1.17
VEGFC-201ENST00000507638 RGMBQ6NW40 437 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 USP50Q70EL3 339 aaPredicted RBP7.72□□□□□ -1.17
VEGFC-201ENST00000507638 Q7L0L9 218 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 GPC2Q8N158 579 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 GLIS2Q9BZE0 524 aaPredicted RBP7.72□□□□□ -1.17
VEGFC-201ENST00000507638 ZNF395Q9H8N7 513 aaPredicted RBP7.72□□□□□ -1.17
VEGFC-201ENST00000507638 DNMT3LQ9UJW3 386 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 GJA3Q9Y6H8 435 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 VCANP13611 3396 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 TTC21AQ8NDW8 1320 aa7.72□□□□□ -1.17
VEGFC-201ENST00000507638 USP31Q70CQ4 1352 aa7.71□□□□□ -1.17
VEGFC-201ENST00000507638 CACNA1SQ13698 1873 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 POM121CA8CG34 1229 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 MEN1O00255 615 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 CYP27B1O15528 508 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 CTSOP43234 321 aaPredicted RBP7.71□□□□□ -1.18
VEGFC-201ENST00000507638 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.18
VEGFC-201ENST00000507638 XAGE2Q96GT9 111 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 GMCL1Q96IK5 515 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 SLC4A9Q96Q91 983 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 PRO3102Q9H379 93 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 ATG3Q9NT62 314 aa7.71□□□□□ -1.18
VEGFC-201ENST00000507638 USP42Q9H9J4 1324 aaKnown RBP7.71□□□□□ -1.18
VEGFC-201ENST00000507638 RANBP2P49792 3224 aaKnown RBP7.7□□□□□ -1.18
VEGFC-201ENST00000507638 FZD9O00144 591 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 BACH1O14867 736 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 TATP17735 454 aaPredicted RBP7.7□□□□□ -1.18
VEGFC-201ENST00000507638 ZNF157P51786 506 aaPredicted RBP7.7□□□□□ -1.18
VEGFC-201ENST00000507638 USHBP1Q8N6Y0 703 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 RAPGEF4Q8WZA2 1011 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 DPF3Q92784 378 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 CNKSR1Q969H4 720 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 ARHGEF10LQ9HCE6 1279 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 ZNF277Q9NRM2 450 aaPredicted RBP7.7□□□□□ -1.18
VEGFC-201ENST00000507638 SLX4Q8IY92 1834 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 PCDH11XQ9BZA7 1347 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 PCDH11YQ9BZA8 1340 aa7.7□□□□□ -1.18
VEGFC-201ENST00000507638 RBBP6Q7Z6E9 1792 aaKnown RBP7.69□□□□□ -1.18
VEGFC-201ENST00000507638 BRCA2P51587 3418 aa7.69□□□□□ -1.18
VEGFC-201ENST00000507638 SPATA31C2B4DYI2 1134 aa7.69□□□□□ -1.18
VEGFC-201ENST00000507638 WFS1O76024 890 aa7.69□□□□□ -1.18
VEGFC-201ENST00000507638 NCOA4Q13772 614 aa7.69□□□□□ -1.18
VEGFC-201ENST00000507638 NFIXQ14938 502 aa7.69□□□□□ -1.18
VEGFC-201ENST00000507638 USPL1Q5W0Q7 1092 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms