RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 RTF1Q92541 710 aaKnown RBP6.31□□□□□ -1.4
CPNE4-207ENST00000506687 GPATCH3Q96I76 525 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 HINFPQ9BQA5 517 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 ZSWIM4Q9H7M6 989 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 PARP2Q9UGN5 583 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 UBR2Q8IWV8 1755 aa6.31□□□□□ -1.4
CPNE4-207ENST00000506687 TAF1LQ8IZX4 1826 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 BTBD11A6QL63 1104 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 LDHBP07195 334 aaKnown RBP6.3□□□□□ -1.4
CPNE4-207ENST00000506687 TNNI2P48788 182 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 FANCCQ00597 558 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 TEFQ10587 303 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 GRM1Q13255 1194 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 GNL2Q13823 731 aaKnown RBP6.3□□□□□ -1.4
CPNE4-207ENST00000506687 PROX2Q3B8N5 592 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 CCDC102BQ68D86 513 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 ZNF592Q92610 1267 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 ZNF496Q96IT1 587 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-207ENST00000506687 SPACA7Q96KW9 195 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 DUSP9Q99956 384 aaKnown RBP6.3□□□□□ -1.4
CPNE4-207ENST00000506687 TAF1DQ9H5J8 278 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-207ENST00000506687 BCL2L12Q9HB09 334 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 RNF19AQ9NV58 838 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 MIS18AQ9NYP9 233 aa6.3□□□□□ -1.4
CPNE4-207ENST00000506687 MYH14Q7Z406 1995 aaKnown RBP6.29□□□□□ -1.4
CPNE4-207ENST00000506687 THSD7BQ9C0I4 1608 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 KDM3BQ7LBC6 1761 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 SORBS3O60504 671 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 PTCD1O75127 700 aaKnown RBP6.29□□□□□ -1.4
CPNE4-207ENST00000506687 DDNO94850 711 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-207ENST00000506687 CHRNA5P30532 468 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 MAPK8P45983 427 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 EIF4A1P60842 406 aaKnown RBP6.29□□□□□ -1.4
CPNE4-207ENST00000506687 IGBP1P78318 339 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 GTF2IP78347 998 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 NAA30Q147X3 362 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-207ENST00000506687 ERFEQ4G0M1 354 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 ARSIQ5FYB1 569 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 TRAPPC3LQ5T215 181 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 RC3H1Q5TC82 1133 aaKnown RBP6.29□□□□□ -1.4
CPNE4-207ENST00000506687 WDR63Q8IWG1 891 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 LINC00116Q8NCU8 138 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 TPCN2Q8NHX9 752 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 PSMD1Q99460 953 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 METTL5Q9NRN9 209 aaKnown RBP6.29□□□□□ -1.4
CPNE4-207ENST00000506687 MAP10Q9P2G4 905 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 VTI1BQ9UEU0 232 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 KIF13BQ9NQT8 1826 aa6.29□□□□□ -1.4
CPNE4-207ENST00000506687 IL16Q14005 1332 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 C4BP0C0L5 1744 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 hCG_2014768A0A024R1R8 64 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 PRAMEF22A3QJZ6 481 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 NFKBIEO00221 500 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 AOC2O75106 756 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 CFHP08603 1231 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 CYP19A1P11511 503 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 ZNF76P36508 570 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 MCCD1P59942 119 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 PTPROQ16827 1216 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 OXLD1Q5BKU9 147 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 PPP4R3BQ5MIZ7 849 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 INTS5Q6P9B9 1019 aaKnown RBP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 PNMA8AQ86V59 439 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 DNAJC10Q8IXB1 793 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 MPNDQ8N594 471 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 ARMC5Q96C12 935 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 FMNL2Q96PY5 1086 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 RBCK1Q9BYM8 510 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 DDX21Q9NR30 783 aaKnown RBP eCLIP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 MBIPQ9NS73 344 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 IFT57Q9NWB7 429 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 PPME1Q9Y570 386 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 USP16Q9Y5T5 823 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 C5P01031 1676 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 N4BP2Q86UW6 1770 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 COL5A3P25940 1745 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-207ENST00000506687 TJP1Q07157 1748 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 LTBP1Q14766 1721 aa6.28□□□□□ -1.4
CPNE4-207ENST00000506687 CNTNAP4Q9C0A0 1308 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 TREHO43280 583 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 PRPF40AO75400 957 aaKnown RBP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 SNRPA1P09661 255 aaKnown RBP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 GYS1P13807 737 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 GNAI1P63096 354 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 PLCB3Q01970 1234 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 PTK2Q05397 1052 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 CALD1Q05682 793 aaKnown RBP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 FMR1Q06787 632 aaKnown RBP eCLIP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 PSMD2Q13200 908 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 FKBP5Q13451 457 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 MAP1SQ66K74 1059 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 PPP1R18Q6NYC8 613 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 TMC4Q7Z404 712 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 TRMT2AQ8IZ69 625 aaKnown RBP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 TTC5Q8N0Z6 440 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 VTI1AQ96AJ9 217 aa6.27□□□□□ -1.41
CPNE4-207ENST00000506687 PURBQ96QR8 312 aaKnown RBP6.27□□□□□ -1.41
CPNE4-207ENST00000506687 TEX13AQ9BXU3 409 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms