RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 CCDC146Q8IYE0 955 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 PHACTR3Q96KR7 559 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 C2orf49Q9BVC5 232 aaPredicted RBP9.91□□□□□ -0.82
RPGR-210ENST00000494841 BRWD3Q6RI45 1802 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
RPGR-210ENST00000494841 DISP2A7MBM2 1401 aa9.9□□□□□ -0.82
RPGR-210ENST00000494841 NCAPD2Q15021 1401 aa9.9□□□□□ -0.82
RPGR-210ENST00000494841 KDRP35968 1356 aa9.9□□□□□ -0.82
RPGR-210ENST00000494841 FKBP5Q13451 457 aaPredicted RBP9.9□□□□□ -0.82
RPGR-210ENST00000494841 DDB1Q16531 1140 aa9.9□□□□□ -0.82
RPGR-210ENST00000494841 CCDC155Q8N6L0 562 aa9.9□□□□□ -0.82
RPGR-210ENST00000494841 ZCRB1Q8TBF4 217 aaKnown RBP9.9□□□□□ -0.82
RPGR-210ENST00000494841 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
RPGR-210ENST00000494841 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
RPGR-210ENST00000494841 A0A1B0GTH6 734 aa9.89□□□□□ -0.83
RPGR-210ENST00000494841 ATP4AP20648 1035 aa9.89□□□□□ -0.83
RPGR-210ENST00000494841 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
RPGR-210ENST00000494841 MTHFSDQ2M296 383 aaKnown RBP9.89□□□□□ -0.83
RPGR-210ENST00000494841 PLEKHF1Q96S99 279 aa9.89□□□□□ -0.83
RPGR-210ENST00000494841 ZNF232Q9UNY5 417 aa9.89□□□□□ -0.83
RPGR-210ENST00000494841 RGS12O14924 1447 aa9.89□□□□□ -0.83
RPGR-210ENST00000494841 KAT6BQ8WYB5 2073 aa9.88□□□□□ -0.83
RPGR-210ENST00000494841 THSD7AQ9UPZ6 1657 aa9.88□□□□□ -0.83
RPGR-210ENST00000494841 TXLNAP40222 546 aa9.88□□□□□ -0.83
RPGR-210ENST00000494841 PLEKHO1Q53GL0 409 aaPredicted RBP9.88□□□□□ -0.83
RPGR-210ENST00000494841 MARCH10Q8NA82 808 aaPredicted RBP9.88□□□□□ -0.83
RPGR-210ENST00000494841 SPG7Q9UQ90 795 aa9.88□□□□□ -0.83
RPGR-210ENST00000494841 CHMP3Q9Y3E7 222 aa9.88□□□□□ -0.83
RPGR-210ENST00000494841 OVOS2A0A0G2JMS6 1433 aa9.88□□□□□ -0.83
RPGR-210ENST00000494841 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
RPGR-210ENST00000494841 LRRC37A3O60309 1634 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 CYP27B1O15528 508 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 SSFA2P28290 1259 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 MSX1P28360 303 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 PHLDB3Q6NSJ2 640 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 ILDR2Q71H61 639 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 KRT27Q7Z3Y8 459 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 ZDHHC3Q9NYG2 299 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 SHANK3Q9BYB0 1731 aa9.87□□□□□ -0.83
RPGR-210ENST00000494841 PDE4CQ08493 712 aa9.86□□□□□ -0.83
RPGR-210ENST00000494841 AMOTQ4VCS5 1084 aa9.86□□□□□ -0.83
RPGR-210ENST00000494841 ZNF530Q6P9A1 599 aaPredicted RBP9.86□□□□□ -0.83
RPGR-210ENST00000494841 C1orf216Q8TAB5 229 aa9.86□□□□□ -0.83
RPGR-210ENST00000494841 AIDAQ96BJ3 306 aa9.86□□□□□ -0.83
RPGR-210ENST00000494841 RUNDC1Q96C34 613 aa9.86□□□□□ -0.83
RPGR-210ENST00000494841 RRP7AQ9Y3A4 280 aaKnown RBP9.86□□□□□ -0.83
RPGR-210ENST00000494841 PKD1L3Q7Z443 1732 aa9.85□□□□□ -0.83
RPGR-210ENST00000494841 PPFIA3O75145 1194 aa9.85□□□□□ -0.83
RPGR-210ENST00000494841 F11P03951 625 aa9.85□□□□□ -0.83
RPGR-210ENST00000494841 PHKG2P15735 406 aa9.85□□□□□ -0.83
RPGR-210ENST00000494841 GAS2L1Q99501 681 aaPredicted RBP9.85□□□□□ -0.83
RPGR-210ENST00000494841 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
RPGR-210ENST00000494841 GPAMQ9HCL2 828 aa9.85□□□□□ -0.83
RPGR-210ENST00000494841 CUEDC1Q9NWM3 386 aaPredicted RBP9.85□□□□□ -0.83
RPGR-210ENST00000494841 HCN4Q9Y3Q4 1203 aa9.85□□□□□ -0.83
RPGR-210ENST00000494841 MAPK8IP3Q9UPT6 1336 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 TNS2Q63HR2 1409 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 APAF1O14727 1248 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 NEFMP07197 916 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 ITGA6P23229 1130 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 TMPOP42166 694 aaKnown RBP9.84□□□□□ -0.83
RPGR-210ENST00000494841 C1orf141Q5JVX7 400 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 MPRIPQ6WCQ1 1025 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 CAPN12Q6ZSI9 719 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 MKNK1Q9BUB5 465 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 PHACTR1Q9C0D0 580 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 LGR6Q9HBX8 967 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 NXF1Q9UBU9 619 aaKnown RBP9.84□□□□□ -0.83
RPGR-210ENST00000494841 DLG5Q8TDM6 1919 aa9.84□□□□□ -0.83
RPGR-210ENST00000494841 PCDH11XQ9BZA7 1347 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 PCDH11YQ9BZA8 1340 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 KCNQ2O43526 872 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 THBS1P07996 1170 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 SCNN1AP37088 669 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 RIPK4P57078 832 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 DCTN1Q14203 1278 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 NFE2L2Q16236 605 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 C1orf53Q5VUE5 145 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 PTF1AQ7RTS3 328 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 ALDH16A1Q8IZ83 802 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 COL26A1Q96A83 441 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 TRAIPQ9BWF2 469 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 RUBCNLQ9H714 662 aa9.83□□□□□ -0.84
RPGR-210ENST00000494841 VIRMAQ69YN4 1812 aaKnown RBP9.82□□□□□ -0.84
RPGR-210ENST00000494841 GNAT3A8MTJ3 354 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 VEGFBP49765 207 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 RIPOR1Q6ZS17 1223 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 MCM10Q7L590 875 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 IL17REQ8NFR9 667 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 VTI1AQ96AJ9 217 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 KLRG1Q96E93 195 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 CRISPLD1Q9H336 500 aa9.82□□□□□ -0.84
RPGR-210ENST00000494841 H3BM21 787 aa9.81□□□□□ -0.84
RPGR-210ENST00000494841 RNMTO43148 476 aaKnown RBP9.81□□□□□ -0.84
RPGR-210ENST00000494841 TRIM37O94972 964 aa9.81□□□□□ -0.84
RPGR-210ENST00000494841 B4GALNT3Q6L9W6 998 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms