RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 PTK7Q13308 1070 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 HIF1AQ16665 826 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 SAMD5Q5TGI4 173 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 C1orf53Q5VUE5 145 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 FAM196AQ6ZSG2 479 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 ANKMY2Q8IV38 441 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 RHPN1Q8TCX5 695 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 ZIC5Q96T25 663 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 CARD10Q9BWT7 1032 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 OXCT2Q9BYC2 517 aaPredicted RBP6.98□□□□□ -1.29
SF3A3-207ENST00000488934 ANKIB1Q9P2G1 1089 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 ADAMTS8Q9UP79 889 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 MAP2P11137 1827 aaKnown RBP6.98□□□□□ -1.29
SF3A3-207ENST00000488934 OVOS2A0A0G2JMS6 1433 aa6.98□□□□□ -1.29
SF3A3-207ENST00000488934 FLT4P35916 1363 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 EP400Q96L91 3159 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 EML1O00423 815 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 BNIP3LO60238 219 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 FAM157BP0CG42 384 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 RFX1P22670 979 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 UBAP2LQ14157 1087 aaKnown RBP6.97□□□□□ -1.29
SF3A3-207ENST00000488934 CRTC2Q53ET0 693 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-207ENST00000488934 TBCELQ5QJ74 424 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 STAG2Q8N3U4 1231 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 GOLGA6L1Q8N7Z2 621 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 ANKRD24Q8TF21 1146 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 ZDHHC1Q8WTX9 485 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 IP6K1Q92551 441 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 CCDC97Q96F63 343 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-207ENST00000488934 SCARF2Q96GP6 870 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-207ENST00000488934 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 TNS1Q9HBL0 1735 aaKnown RBP6.97□□□□□ -1.29
SF3A3-207ENST00000488934 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 MAP3K19Q56UN5 1328 aa6.97□□□□□ -1.29
SF3A3-207ENST00000488934 TNS2Q63HR2 1409 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 RGPD3A6NKT7 1758 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-207ENST00000488934 RGPD4Q7Z3J3 1758 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 KHNYNO15037 678 aaKnown RBP6.96□□□□□ -1.3
SF3A3-207ENST00000488934 HOXC9P31274 260 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 TXLNAP40222 546 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 BAG6P46379 1132 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 LAMC2Q13753 1193 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 DDB1Q16531 1140 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 PODNQ7Z5L7 613 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 SCG3Q8WXD2 468 aaKnown RBP6.96□□□□□ -1.3
SF3A3-207ENST00000488934 NLRP2Q9NX02 1062 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 KNSTRNQ9Y448 316 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 SBF2Q86WG5 1849 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 KIF7Q2M1P5 1343 aa6.96□□□□□ -1.3
SF3A3-207ENST00000488934 INSRP06213 1382 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 PARD3Q8TEW0 1356 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 DISP2A7MBM2 1401 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 BCL9O00512 1426 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 DKK1O94907 266 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 ARHGEF15O94989 841 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 IL2RBP14784 551 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 FAM182BQ5T319 152 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 FAM200AQ8TCP9 573 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 ACDQ96AP0 544 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 KLRG1Q96E93 195 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 PANK3Q9H999 370 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 PEAK1Q9H792 1746 aa6.95□□□□□ -1.3
SF3A3-207ENST00000488934 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 EXOC5O00471 708 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 MAPTP10636 758 aaKnown RBP6.94□□□□□ -1.3
SF3A3-207ENST00000488934 IGFBP4P22692 258 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 TNP2Q05952 138 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 VTI1AQ96AJ9 217 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 PHACTR1Q9C0D0 580 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 AVENQ9NQS1 362 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-207ENST00000488934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.94□□□□□ -1.3
SF3A3-207ENST00000488934 MARK1Q9P0L2 795 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 SERPINA10Q9UK55 444 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 PRR12Q9ULL5 1215 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 RGPD2P0DJD1 1756 aa6.94□□□□□ -1.3
SF3A3-207ENST00000488934 KAT6BQ8WYB5 2073 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 PHF20L1A8MW92 1017 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 OIP5O43482 229 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 ARAFP10398 606 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 KCNMA1Q12791 1236 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 RRS1Q15050 365 aaKnown RBP6.93□□□□□ -1.3
SF3A3-207ENST00000488934 LRRC69Q6ZNQ3 347 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 C2orf49Q9BVC5 232 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-207ENST00000488934 HCN4Q9Y3Q4 1203 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 NHSQ6T4R5 1651 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 PLEKHG2Q9H7P9 1386 aa6.93□□□□□ -1.3
SF3A3-207ENST00000488934 PIK3R2O00459 728 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 PPM1GO15355 546 aaPredicted RBP6.92□□□□□ -1.3
SF3A3-207ENST00000488934 ADH6P28332 368 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 CTBSQ01459 385 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 KANK3Q6NY19 840 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 SLCO4C1Q6ZQN7 724 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 ERICH6Q7L0X2 663 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 MORC1Q86VD1 984 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 RAPGEF4Q8WZA2 1011 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 LTV1Q96GA3 475 aaPredicted RBP6.92□□□□□ -1.3
SF3A3-207ENST00000488934 RREB1Q92766 1687 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms