RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 RPS6KB1P23443 525 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 POLD1P28340 1107 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 GSTO1P78417 241 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 ADCK5Q3MIX3 580 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 TXNRD3Q86VQ6 643 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 TBC1D22AQ8WUA7 517 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 INTS4Q96HW7 963 aaKnown RBP7.32□□□□□ -1.24
VAMP3-203ENST00000487194 TMX3Q96JJ7 454 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 ZC3H12CQ9C0D7 883 aaKnown RBP7.32□□□□□ -1.24
VAMP3-203ENST00000487194 COA1Q9GZY4 146 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 SLKQ9H2G2 1235 aaPredicted RBP7.32□□□□□ -1.24
VAMP3-203ENST00000487194 CD209Q9NNX6 404 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 SH2B1Q9NRF2 756 aaPredicted RBP7.32□□□□□ -1.24
VAMP3-203ENST00000487194 POLLQ9UGP5 575 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 LIMCH1Q9UPQ0 1083 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 C10orf71Q711Q0 1435 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 MYH13Q9UKX3 1938 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 E7EWF7 191 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 LDHBP07195 334 aaKnown RBP7.31□□□□□ -1.24
VAMP3-203ENST00000487194 LDHCP07864 332 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 COL11A2P13942 1736 aaPredicted RBP7.31□□□□□ -1.24
VAMP3-203ENST00000487194 AK2P54819 239 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 TRDNQ13061 729 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 CUL4AQ13619 759 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 LTBP1Q14766 1721 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 DHX32Q7L7V1 743 aaKnown RBP7.31□□□□□ -1.24
VAMP3-203ENST00000487194 DZIP1Q86YF9 867 aaKnown RBP7.31□□□□□ -1.24
VAMP3-203ENST00000487194 CERS3Q8IU89 383 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 SLF2Q8IX21 1173 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 IFNL3Q8IZI9 196 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 SPRYD3Q8NCJ5 442 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 SUPT20HQ8NEM7 779 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 NSUN4Q96CB9 384 aaKnown RBP7.31□□□□□ -1.24
VAMP3-203ENST00000487194 CHMP4CQ96CF2 233 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 MTFR1LQ9H019 292 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 NAPBQ9H115 298 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 ARMT1Q9H993 441 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 PCDH10Q9P2E7 1040 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 SUGT1Q9Y2Z0 365 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 SLC4A4Q9Y6R1 1079 aa7.31□□□□□ -1.24
VAMP3-203ENST00000487194 FAM205AQ6ZU69 1335 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 MYO5AQ9Y4I1 1855 aaKnown RBP7.3□□□□□ -1.24
VAMP3-203ENST00000487194 G3V3G9 751 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 FOXP2O15409 715 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 DDIT3P35638 169 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 NUCB2P80303 420 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 FGD1P98174 961 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 MECOMQ03112 1051 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 DCAF8Q5TAQ9 597 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 SOGA3Q5TF21 947 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 TTLL5Q6EMB2 1281 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 RALYLQ86SE5 291 aaKnown RBP7.3□□□□□ -1.24
VAMP3-203ENST00000487194 LCORLQ8N3X6 602 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 MIGA1Q8NAN2 632 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 NCOA7Q8NI08 942 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 GPR101Q96P66 508 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-203ENST00000487194 RIOK1Q9BRS2 568 aaKnown RBP7.3□□□□□ -1.24
VAMP3-203ENST00000487194 NOL10Q9BSC4 688 aaKnown RBP7.3□□□□□ -1.24
VAMP3-203ENST00000487194 RTFDC1Q9BY42 306 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-203ENST00000487194 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.3□□□□□ -1.24
VAMP3-203ENST00000487194 MAST2Q6P0Q8 1798 aa7.3□□□□□ -1.24
VAMP3-203ENST00000487194 WDR19Q8NEZ3 1342 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 GSG1L2A8MUP6 293 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 RIMBP2O15034 1052 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 BAG3O95817 575 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 PDIA4P13667 645 aaKnown RBP7.29□□□□□ -1.24
VAMP3-203ENST00000487194 CPA1P15085 419 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 PRDX5P30044 214 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 CHRNA5P30532 468 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 MCM5P33992 734 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 TDO2P48775 406 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 TGFB2P61812 414 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 STOX1Q6ZVD7 989 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 NOL8Q76FK4 1167 aaKnown RBP7.29□□□□□ -1.24
VAMP3-203ENST00000487194 PODNQ7Z5L7 613 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 RTKN2Q8IZC4 609 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 FBXL16Q8N461 479 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 TTLL6Q8N841 843 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 C7orf43Q8WVR3 580 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 CRNKL1Q9BZJ0 848 aaKnown RBP7.29□□□□□ -1.24
VAMP3-203ENST00000487194 PDGFDQ9GZP0 370 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-203ENST00000487194 RNF41Q9H4P4 317 aaPredicted RBP7.29□□□□□ -1.24
VAMP3-203ENST00000487194 CNNM2Q9H8M5 875 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 ATP8A2Q9NTI2 1148 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 TAF6LQ9Y6J9 622 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 CACNA1SQ13698 1873 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 CCDC88AQ3V6T2 1871 aa7.29□□□□□ -1.24
VAMP3-203ENST00000487194 SLC34A2O95436 690 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 PCP11498 1178 aaKnown RBP7.28□□□□□ -1.24
VAMP3-203ENST00000487194 PLCG2P16885 1265 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 NT5C2P49902 561 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 PPP4CP60510 307 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 HAND2P61296 217 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 FKBP1AP62942 108 aaKnown RBP7.28□□□□□ -1.24
VAMP3-203ENST00000487194 GTF2IP78347 998 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 EXOSC10Q01780 885 aaKnown RBP7.28□□□□□ -1.24
VAMP3-203ENST00000487194 CCDC93Q567U6 631 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 MFSD14BQ5SR56 506 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 MFSD6Q6ZSS7 791 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms