RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 IKBKEQ14164 716 aa6.25□□□□□ -1.41
FN1-222ENST00000485567 DIEXFQ68CQ4 756 aaKnown RBP6.25□□□□□ -1.41
FN1-222ENST00000485567 KANK3Q6NY19 840 aa6.25□□□□□ -1.41
FN1-222ENST00000485567 C20orf204Q6ZNR8 217 aa6.25□□□□□ -1.41
FN1-222ENST00000485567 SLITRK4Q8IW52 837 aa6.25□□□□□ -1.41
FN1-222ENST00000485567 WNT8BQ93098 351 aa6.25□□□□□ -1.41
FN1-222ENST00000485567 COL25A1Q9BXS0 654 aaPredicted RBP6.25□□□□□ -1.41
FN1-222ENST00000485567 LACRTQ9GZZ8 138 aa6.25□□□□□ -1.41
FN1-222ENST00000485567 SH2B1Q9NRF2 756 aaPredicted RBP6.25□□□□□ -1.41
FN1-222ENST00000485567 GINM1Q9NU53 330 aa6.25□□□□□ -1.41
FN1-222ENST00000485567 H3BRJ5 948 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 SOX1O00570 391 aaPredicted RBP6.24□□□□□ -1.41
FN1-222ENST00000485567 EPXP11678 715 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 LMNB1P20700 586 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 NASPP49321 788 aaPredicted RBP6.24□□□□□ -1.41
FN1-222ENST00000485567 AP3B2Q13367 1082 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 GRIK5Q16478 980 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 SULF2Q8IWU5 870 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 GATAD2BQ8WXI9 593 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 NKD1Q969G9 470 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
FN1-222ENST00000485567 LNPKQ9C0E8 428 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 MIR1-1HGQ9H1L0 117 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 EFR3BQ9Y2G0 817 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 STARD13Q9Y3M8 1113 aa6.24□□□□□ -1.41
FN1-222ENST00000485567 FAM221AA4D161 298 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 SSBP05455 408 aaKnown RBP eCLIP6.23□□□□□ -1.41
FN1-222ENST00000485567 ZNF252P-AS1Q0IIN9 211 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 APOBRQ0VD83 1088 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 RNFT1Q5M7Z0 435 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 GDF6Q6KF10 455 aaPredicted RBP6.23□□□□□ -1.41
FN1-222ENST00000485567 LLGL2Q6P1M3 1020 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 NOP9Q86U38 636 aaKnown RBP6.23□□□□□ -1.41
FN1-222ENST00000485567 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 PPME1Q9Y570 386 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 PCDHB5Q9Y5E4 795 aa6.23□□□□□ -1.41
FN1-222ENST00000485567 TERTO14746 1132 aaKnown RBP6.22□□□□□ -1.41
FN1-222ENST00000485567 CILPO75339 1184 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 TRIM37O94972 964 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 F13A1P00488 732 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 EPHA1P21709 976 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 BAG6P46379 1132 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 PIP4K2BP78356 416 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 NFX1Q12986 1120 aaKnown RBP6.22□□□□□ -1.41
FN1-222ENST00000485567 MPP2Q14168 576 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 RASIP1Q5U651 963 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 NBPF6Q5VWK0 638 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 BNC2Q6ZN30 1099 aaPredicted RBP6.22□□□□□ -1.41
FN1-222ENST00000485567 PDZD3Q86UT5 571 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 IL22RA1Q8N6P7 574 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 STK35Q8TDR2 534 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 SLC16A10Q8TF71 515 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 NUDT8Q8WV74 236 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 NBPF4Q96M43 638 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 OSGEPQ9NPF4 335 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 LRRC4BQ9NT99 713 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 CACNA2D2Q9NY47 1150 aa6.22□□□□□ -1.41
FN1-222ENST00000485567 LILRB5O75023 590 aa6.21□□□□□ -1.42
FN1-222ENST00000485567 CANXP27824 592 aaKnown RBP6.21□□□□□ -1.42
FN1-222ENST00000485567 CRKP46108 304 aa6.21□□□□□ -1.42
FN1-222ENST00000485567 ARL4DP49703 201 aa6.21□□□□□ -1.42
FN1-222ENST00000485567 AFF1P51825 1210 aaKnown RBP6.21□□□□□ -1.42
FN1-222ENST00000485567 FAM117BQ6P1L5 589 aa6.21□□□□□ -1.42
FN1-222ENST00000485567 ACDQ96AP0 544 aa6.21□□□□□ -1.42
FN1-222ENST00000485567 JPH1Q9HDC5 661 aaPredicted RBP6.21□□□□□ -1.42
FN1-222ENST00000485567 ALBP02768 609 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 CYP11A1P05108 521 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 GSTP1P09211 210 aaKnown RBP6.2□□□□□ -1.42
FN1-222ENST00000485567 ZNF165P49910 485 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 C19orf57Q0VDD7 668 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 CWF19L2Q2TBE0 894 aaKnown RBP6.2□□□□□ -1.42
FN1-222ENST00000485567 CCDC144BQ3MJ40 725 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 ILDR2Q71H61 639 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 CKAP2LQ8IYA6 745 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 REXO1Q8N1G1 1221 aaKnown RBP6.2□□□□□ -1.42
FN1-222ENST00000485567 GRIN3AQ8TCU5 1115 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 EDARADDQ8WWZ3 215 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
FN1-222ENST00000485567 BTBD6Q96KE9 485 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 CBX8Q9HC52 389 aa6.2□□□□□ -1.42
FN1-222ENST00000485567 CADPSQ9ULU8 1353 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 ADAMTS2O95450 1211 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 GSTM4Q03013 218 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 SEPT6Q14141 434 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 SEZ6Q53EL9 994 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
FN1-222ENST00000485567 REC114Q7Z4M0 266 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 FBXO27Q8NI29 283 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 CPLX3Q8WVH0 158 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 IRF7Q92985 503 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 GAL3ST3Q96A11 431 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 SRRTQ9BXP5 876 aaKnown RBP6.19□□□□□ -1.42
FN1-222ENST00000485567 ZNF408Q9H9D4 720 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 KRT82Q9NSB4 513 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 ERBB4Q15303 1308 aa6.19□□□□□ -1.42
FN1-222ENST00000485567 LINC01387J3KSC0 135 aa6.18□□□□□ -1.42
FN1-222ENST00000485567 M0R082 166 aa6.18□□□□□ -1.42
FN1-222ENST00000485567 FSCN2O14926 492 aa6.18□□□□□ -1.42
FN1-222ENST00000485567 TLR3O15455 904 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms