RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ESPNB1AK53 854 aa11.46□□□□□ -0.57
COL8A1-207ENST00000483969 ITGA6P23229 1130 aa11.46□□□□□ -0.57
COL8A1-207ENST00000483969 NFIXQ14938 502 aa11.46□□□□□ -0.57
COL8A1-207ENST00000483969 CCDC30Q5VVM6 783 aa11.46□□□□□ -0.57
COL8A1-207ENST00000483969 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
COL8A1-207ENST00000483969 RNF217Q8TC41 542 aa11.46□□□□□ -0.57
COL8A1-207ENST00000483969 TSR2Q969E8 191 aaKnown RBP11.46□□□□□ -0.57
COL8A1-207ENST00000483969 HYPKQ9NX55 129 aa11.46□□□□□ -0.57
COL8A1-207ENST00000483969 LRP5O75197 1615 aa11.46□□□□□ -0.58
COL8A1-207ENST00000483969 SERPINB2P05120 415 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 RAB15P59190 212 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 TGFB2P61812 414 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 TBC1D9BQ66K14 1250 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
COL8A1-207ENST00000483969 CNTNAP3BQ96NU0 1288 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 COL25A1Q9BXS0 654 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-207ENST00000483969 CNTNAP3Q9BZ76 1288 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 TMPRSS4Q9NRS4 437 aa11.45□□□□□ -0.58
COL8A1-207ENST00000483969 CICQ96RK0 1608 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-207ENST00000483969 TJP1Q07157 1748 aa11.44□□□□□ -0.58
COL8A1-207ENST00000483969 MAP3K15Q6ZN16 1313 aa11.44□□□□□ -0.58
COL8A1-207ENST00000483969 ERVH48-1M5A8F1 160 aa11.44□□□□□ -0.58
COL8A1-207ENST00000483969 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
COL8A1-207ENST00000483969 DDR1Q08345 913 aa11.44□□□□□ -0.58
COL8A1-207ENST00000483969 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
COL8A1-207ENST00000483969 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-207ENST00000483969 TTLL7Q6ZT98 887 aa11.44□□□□□ -0.58
COL8A1-207ENST00000483969 PCMTD1Q96MG8 357 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-207ENST00000483969 CHPF2Q9P2E5 772 aa11.44□□□□□ -0.58
COL8A1-207ENST00000483969 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-207ENST00000483969 FANCIQ9NVI1 1328 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 E9PSI1 815 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 NPHP1O15259 732 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 LILRA1O75019 489 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 ANXA1P04083 346 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
COL8A1-207ENST00000483969 HLFQ16534 295 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 TMEM259Q4ZIN3 620 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 TSPYL6Q8N831 410 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 STK31Q9BXU1 1019 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 ZNF395Q9H8N7 513 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-207ENST00000483969 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL8A1-207ENST00000483969 UBR2Q8IWV8 1755 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 QSER1Q2KHR3 1735 aa11.43□□□□□ -0.58
COL8A1-207ENST00000483969 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
COL8A1-207ENST00000483969 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
COL8A1-207ENST00000483969 RNF225M0QZC1 329 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-207ENST00000483969 KCNMA1Q12791 1236 aa11.42□□□□□ -0.58
COL8A1-207ENST00000483969 PROSER3Q2NL68 480 aa11.42□□□□□ -0.58
COL8A1-207ENST00000483969 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
COL8A1-207ENST00000483969 COL5A3P25940 1745 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-207ENST00000483969 CDC14CA4D256 554 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 VAMP4O75379 141 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 DDX58O95786 925 aaKnown RBP11.41□□□□□ -0.58
COL8A1-207ENST00000483969 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
COL8A1-207ENST00000483969 PTGIRP43119 386 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 GPR162Q16538 588 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 SV2AQ7L0J3 742 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 NBPF5PQ86XG9 351 aaPredicted RBP11.41□□□□□ -0.58
COL8A1-207ENST00000483969 NLGN2Q8NFZ4 835 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 NYXQ9GZU5 481 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
COL8A1-207ENST00000483969 PDE6BP35913 854 aa11.4□□□□□ -0.58
COL8A1-207ENST00000483969 ST5P78524 1137 aa11.4□□□□□ -0.58
COL8A1-207ENST00000483969 PARP10Q53GL7 1025 aa11.4□□□□□ -0.58
COL8A1-207ENST00000483969 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
COL8A1-207ENST00000483969 ZNF34Q8IZ26 560 aa11.4□□□□□ -0.58
COL8A1-207ENST00000483969 CNBD1Q8NA66 436 aa11.4□□□□□ -0.58
COL8A1-207ENST00000483969 BRIP1Q9BX63 1249 aa11.4□□□□□ -0.58
COL8A1-207ENST00000483969 UBR3Q6ZT12 1888 aa11.4□□□□□ -0.59
COL8A1-207ENST00000483969 DLG5Q8TDM6 1919 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 A0A0G2JLW4 131 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 H0YIN7 160 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 GRIN3BO60391 1043 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 PPP1R42Q7Z4L9 355 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
COL8A1-207ENST00000483969 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
COL8A1-207ENST00000483969 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
COL8A1-207ENST00000483969 DPEP1P16444 411 aa11.38□□□□□ -0.59
COL8A1-207ENST00000483969 GPTP24298 496 aa11.38□□□□□ -0.59
COL8A1-207ENST00000483969 HNRNPUQ00839 825 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL8A1-207ENST00000483969 RNFT1Q5M7Z0 435 aa11.38□□□□□ -0.59
COL8A1-207ENST00000483969 VWA5B2Q8N398 1253 aa11.38□□□□□ -0.59
COL8A1-207ENST00000483969 PHAXQ9H814 394 aaKnown RBP11.38□□□□□ -0.59
COL8A1-207ENST00000483969 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
COL8A1-207ENST00000483969 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
COL8A1-207ENST00000483969 ADD1P35611 737 aaKnown RBP11.37□□□□□ -0.59
COL8A1-207ENST00000483969 LYSMD3Q7Z3D4 306 aa11.37□□□□□ -0.59
COL8A1-207ENST00000483969 C2CD5Q86YS7 1000 aa11.37□□□□□ -0.59
COL8A1-207ENST00000483969 TRMT2AQ8IZ69 625 aaKnown RBP11.37□□□□□ -0.59
COL8A1-207ENST00000483969 SVOPQ8N4V2 548 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms