RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 TMC1Q8TDI8 760 aa7.12□□□□□ -1.27
NSMCE4A-210ENST00000483541 ALKBH8Q96BT7 664 aaKnown RBP7.12□□□□□ -1.27
NSMCE4A-210ENST00000483541 DBNDD2Q9BQY9 259 aa7.12□□□□□ -1.27
NSMCE4A-210ENST00000483541 NRSN2Q9GZP1 204 aa7.12□□□□□ -1.27
NSMCE4A-210ENST00000483541 EIF1AYO14602 144 aaKnown RBP7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 ITPKAP23677 461 aa7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 ORC1Q13415 861 aa7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 SPRED3Q2MJR0 410 aa7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 HP1BP3Q5SSJ5 553 aaPredicted RBP7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 ZDHHC13Q8IUH4 622 aa7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 CCDC74AQ96AQ1 378 aa7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 NIF3L1Q9GZT8 377 aa7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 EHD4Q9H223 541 aa7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 COL17A1Q9UMD9 1497 aaPredicted RBP7.11□□□□□ -1.27
NSMCE4A-210ENST00000483541 GPR182O15218 404 aa7.1□□□□□ -1.27
NSMCE4A-210ENST00000483541 GAS2O43903 313 aaKnown RBP7.1□□□□□ -1.27
NSMCE4A-210ENST00000483541 DLGAP3O95886 979 aa7.1□□□□□ -1.27
NSMCE4A-210ENST00000483541 B3GALT4O96024 378 aa7.1□□□□□ -1.27
NSMCE4A-210ENST00000483541 CD97P48960 835 aa7.1□□□□□ -1.27
NSMCE4A-210ENST00000483541 FMNL2Q96PY5 1086 aa7.1□□□□□ -1.27
NSMCE4A-210ENST00000483541 KCNF1Q9H3M0 494 aa7.1□□□□□ -1.27
NSMCE4A-210ENST00000483541 PAX4O43316 350 aa7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 COBLO75128 1261 aa7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 MAP4P27816 1152 aaKnown RBP7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 TXKP42681 527 aa7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 RPS26P11Q5JNZ5 115 aaPredicted RBP7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 PRPF40BQ6NWY9 871 aaKnown RBP7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 INTS5Q6P9B9 1019 aaKnown RBP7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 CSRNP1Q96S65 589 aa7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 PCMTD2Q9NV79 361 aa7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 TRAK1Q9UPV9 953 aa7.09□□□□□ -1.27
NSMCE4A-210ENST00000483541 YBX3P16989 372 aaKnown RBP eCLIP7.08□□□□□ -1.28
NSMCE4A-210ENST00000483541 GRIK1P39086 918 aa7.08□□□□□ -1.28
NSMCE4A-210ENST00000483541 SOX4Q06945 474 aaPredicted RBP7.08□□□□□ -1.28
NSMCE4A-210ENST00000483541 POU4F3Q15319 338 aa7.08□□□□□ -1.28
NSMCE4A-210ENST00000483541 ZNF576Q9H609 170 aa7.08□□□□□ -1.28
NSMCE4A-210ENST00000483541 KIAA1324LA8MWY0 1029 aaPredicted RBP7.07□□□□□ -1.28
NSMCE4A-210ENST00000483541 MAOBP27338 520 aa7.07□□□□□ -1.28
NSMCE4A-210ENST00000483541 DCTN4Q9UJW0 460 aa7.07□□□□□ -1.28
NSMCE4A-210ENST00000483541 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 PRR19A6NJB7 356 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 GADD45BO75293 160 aaPredicted RBP7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 TGFB1P01137 390 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 DRD2P14416 443 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 SSTR4P31391 388 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 USP11P51784 963 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 SGO2Q562F6 1265 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 C2CD4AQ8NCU7 369 aaPredicted RBP7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 GIMAP7Q8NHV1 300 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 ABCB6Q9NP58 842 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
NSMCE4A-210ENST00000483541 SYNGAP1Q96PV0 1343 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 FAM95CA0A1B0GW59 222 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 RXRBP28702 533 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 AP3B2Q13367 1082 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 CPSF6Q16630 551 aaKnown RBP eCLIP7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 TMC7Q7Z402 723 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 SHKBP1Q8TBC3 707 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 EZH1Q92800 747 aaPredicted RBP7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 CORO1BQ9BR76 489 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 TRIM56Q9BRZ2 755 aaKnown RBP7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 YIPF2Q9BWQ6 316 aa7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 BIN2Q9UBW5 565 aaPredicted RBP7.05□□□□□ -1.28
NSMCE4A-210ENST00000483541 MED26O95402 600 aa7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 XRCC5P13010 732 aaKnown RBP7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 GRM2Q14416 872 aa7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 DSC3Q14574 896 aa7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 PAOXQ6QHF9 649 aa7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 GLIS3Q8NEA6 775 aa7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 EPS8L3Q8TE67 593 aaKnown RBP7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 NLRP2Q9NX02 1062 aa7.04□□□□□ -1.28
NSMCE4A-210ENST00000483541 ADH5P11766 374 aa7.03□□□□□ -1.28
NSMCE4A-210ENST00000483541 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
NSMCE4A-210ENST00000483541 CDPF1Q6NVV7 123 aa7.03□□□□□ -1.28
NSMCE4A-210ENST00000483541 RAD18Q9NS91 495 aa7.03□□□□□ -1.28
NSMCE4A-210ENST00000483541 ATG3Q9NT62 314 aa7.03□□□□□ -1.28
NSMCE4A-210ENST00000483541 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
NSMCE4A-210ENST00000483541 CTSBP07858 339 aa7.02□□□□□ -1.29
NSMCE4A-210ENST00000483541 NFKBIBQ15653 356 aa7.02□□□□□ -1.29
NSMCE4A-210ENST00000483541 DTX1Q86Y01 620 aa7.02□□□□□ -1.29
NSMCE4A-210ENST00000483541 FBLIM1Q8WUP2 373 aa7.02□□□□□ -1.29
NSMCE4A-210ENST00000483541 MFSD14AQ96MC6 490 aa7.02□□□□□ -1.29
NSMCE4A-210ENST00000483541 GSX1Q9H4S2 264 aaPredicted RBP7.02□□□□□ -1.29
NSMCE4A-210ENST00000483541 ARID1BQ8NFD5 2236 aaPredicted RBP7.01□□□□□ -1.29
NSMCE4A-210ENST00000483541 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.01□□□□□ -1.29
NSMCE4A-210ENST00000483541 TREHO43280 583 aa7.01□□□□□ -1.29
NSMCE4A-210ENST00000483541 SPINK2P20155 84 aa7.01□□□□□ -1.29
NSMCE4A-210ENST00000483541 KCNA1Q09470 495 aa7.01□□□□□ -1.29
NSMCE4A-210ENST00000483541 METTL22Q9BUU2 404 aaPredicted RBP7.01□□□□□ -1.29
NSMCE4A-210ENST00000483541 PIM2Q9P1W9 311 aa7.01□□□□□ -1.29
NSMCE4A-210ENST00000483541 AOC2O75106 756 aa7□□□□□ -1.29
NSMCE4A-210ENST00000483541 F13BP05160 661 aa7□□□□□ -1.29
NSMCE4A-210ENST00000483541 MAPK1P28482 360 aa7□□□□□ -1.29
NSMCE4A-210ENST00000483541 HNRNPUQ00839 825 aaKnown RBP eCLIP7□□□□□ -1.29
NSMCE4A-210ENST00000483541 PPP2R3AQ06190 1150 aa7□□□□□ -1.29
NSMCE4A-210ENST00000483541 MAP7Q14244 749 aa7□□□□□ -1.29
NSMCE4A-210ENST00000483541 ENOX2Q16206 610 aaKnown RBP7□□□□□ -1.29
NSMCE4A-210ENST00000483541 AKAP4Q5JQC9 854 aa7□□□□□ -1.29
NSMCE4A-210ENST00000483541 DTHD1Q6ZMT9 781 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms