RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 TMEM87AQ8NBN3 555 aa19.77■□□□□ 0.76
SH3D21-203ENST00000480549 KLHL34Q8N239 644 aa19.77■□□□□ 0.76
SH3D21-203ENST00000480549 GDPD2Q9HCC8 539 aa19.77■□□□□ 0.76
SH3D21-203ENST00000480549 BCAMP50895 628 aa19.76■□□□□ 0.75
SH3D21-203ENST00000480549 IMMTQ16891 758 aaKnown RBP19.76■□□□□ 0.75
SH3D21-203ENST00000480549 ZSCAN23Q3MJ62 389 aa19.76■□□□□ 0.75
SH3D21-203ENST00000480549 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
SH3D21-203ENST00000480549 ZNF445P59923 1031 aa19.76■□□□□ 0.75
SH3D21-203ENST00000480549 USP48Q86UV5 1035 aa19.76■□□□□ 0.75
SH3D21-203ENST00000480549 RBM27Q9P2N5 1060 aaKnown RBP19.76■□□□□ 0.75
SH3D21-203ENST00000480549 CNPY2Q9Y2B0 182 aa19.76■□□□□ 0.75
SH3D21-203ENST00000480549 MBD3O95983 291 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 HAND2P61296 217 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 LARP1BQ659C4 914 aaKnown RBP19.75■□□□□ 0.75
SH3D21-203ENST00000480549 ANKRD18AQ8IVF6 992 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 SEPT12Q8IYM1 358 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 ARHGEF1Q92888 912 aaKnown RBP19.75■□□□□ 0.75
SH3D21-203ENST00000480549 TRPC5Q9UL62 973 aaPredicted RBP19.75■□□□□ 0.75
SH3D21-203ENST00000480549 PFKFB2O60825 505 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 SCRN1Q12765 414 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 PDLIM2Q96JY6 352 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 BSDC1Q9NW68 430 aaPredicted RBP19.75■□□□□ 0.75
SH3D21-203ENST00000480549 ZPR1O75312 459 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 FBXL16Q8N461 479 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 SETDB2Q96T68 719 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 NYXQ9GZU5 481 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 TMEM63CQ9P1W3 806 aa19.75■□□□□ 0.75
SH3D21-203ENST00000480549 VPS37CA5D8V6 355 aaPredicted RBP19.74■□□□□ 0.75
SH3D21-203ENST00000480549 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
SH3D21-203ENST00000480549 TNRC6CQ9HCJ0 1690 aaKnown RBP19.74■□□□□ 0.75
SH3D21-203ENST00000480549 JAK2O60674 1132 aa19.74■□□□□ 0.75
SH3D21-203ENST00000480549 APOBRQ0VD83 1088 aa19.74■□□□□ 0.75
SH3D21-203ENST00000480549 ATP6V1DQ9Y5K8 247 aa19.74■□□□□ 0.75
SH3D21-203ENST00000480549 PDCP20941 246 aa19.73■□□□□ 0.75
SH3D21-203ENST00000480549 CDC37L1Q7L3B6 337 aa19.73■□□□□ 0.75
SH3D21-203ENST00000480549 CHST3Q7LGC8 479 aa19.73■□□□□ 0.75
SH3D21-203ENST00000480549 CELF1Q92879 486 aaKnown RBP19.73■□□□□ 0.75
SH3D21-203ENST00000480549 NBPF3Q9H094 633 aa19.73■□□□□ 0.75
SH3D21-203ENST00000480549 ZNF804BA4D1E1 1349 aa19.73■□□□□ 0.75
SH3D21-203ENST00000480549 PTMAP06454 111 aaKnown RBP19.73■□□□□ 0.75
SH3D21-203ENST00000480549 IRX5P78411 483 aaPredicted RBP19.73■□□□□ 0.75
SH3D21-203ENST00000480549 WTIPA6NIX2 430 aaPredicted RBP19.73■□□□□ 0.75
SH3D21-203ENST00000480549 CERS3Q8IU89 383 aa19.73■□□□□ 0.75
SH3D21-203ENST00000480549 MB21D2Q8IYB1 491 aaPredicted RBP19.73■□□□□ 0.75
SH3D21-203ENST00000480549 CCDC39Q9UFE4 941 aa19.73■□□□□ 0.75
SH3D21-203ENST00000480549 MCM5P33992 734 aa19.72■□□□□ 0.75
SH3D21-203ENST00000480549 NBPF5PQ86XG9 351 aaPredicted RBP19.72■□□□□ 0.75
SH3D21-203ENST00000480549 SMARCC2Q8TAQ2 1214 aa19.72■□□□□ 0.75
SH3D21-203ENST00000480549 STRBPQ96SI9 672 aaKnown RBP19.72■□□□□ 0.75
SH3D21-203ENST00000480549 MINPP1Q9UNW1 487 aa19.72■□□□□ 0.75
SH3D21-203ENST00000480549 UBR3Q6ZT12 1888 aa19.72■□□□□ 0.75
SH3D21-203ENST00000480549 MAGEB6Q8N7X4 407 aa19.72■□□□□ 0.75
SH3D21-203ENST00000480549 BRWD3Q6RI45 1802 aa19.72■□□□□ 0.75
SH3D21-203ENST00000480549 ZNF213O14771 459 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 MAP3K12Q12852 859 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 MPNDQ8N594 471 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 COL1A1P02452 1464 aaPredicted RBP19.71■□□□□ 0.75
SH3D21-203ENST00000480549 EVCP57679 992 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 LRRC4BQ9NT99 713 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 CHD4Q14839 1912 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 CTDNEP1O95476 244 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 DNM1Q05193 864 aaKnown RBP19.71■□□□□ 0.75
SH3D21-203ENST00000480549 UBE4AQ14139 1066 aa19.71■□□□□ 0.75
SH3D21-203ENST00000480549 LLPHQ9BRT6 129 aaKnown RBP19.71■□□□□ 0.75
SH3D21-203ENST00000480549 EP400Q96L91 3159 aa19.7■□□□□ 0.74
SH3D21-203ENST00000480549 U2AF2P26368 475 aaKnown RBP eCLIP19.7■□□□□ 0.74
SH3D21-203ENST00000480549 ZNF274Q96GC6 653 aaPredicted RBP19.7■□□□□ 0.74
SH3D21-203ENST00000480549 ANTXR2P58335 489 aa19.7■□□□□ 0.74
SH3D21-203ENST00000480549 KIAA2012Q0VF49 1180 aa19.7■□□□□ 0.74
SH3D21-203ENST00000480549 PDCL2Q8N4E4 241 aa19.7■□□□□ 0.74
SH3D21-203ENST00000480549 NSUN7Q8NE18 718 aaKnown RBP19.7■□□□□ 0.74
SH3D21-203ENST00000480549 NLRP3Q96P20 1036 aa19.7■□□□□ 0.74
SH3D21-203ENST00000480549 GPHNQ9NQX3 736 aaPredicted RBP19.7■□□□□ 0.74
SH3D21-203ENST00000480549 PDIA3P30101 505 aaKnown RBP19.69■□□□□ 0.74
SH3D21-203ENST00000480549 AIDAQ96BJ3 306 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 GYG1P46976 350 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 TPTE2Q6XPS3 522 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 TBC1D10CQ8IV04 446 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 NCOA7Q8NI08 942 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 ZMYM6O95789 1325 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 FAM196AQ6ZSG2 479 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 CCDC24Q8N4L8 307 aa19.69■□□□□ 0.74
SH3D21-203ENST00000480549 TIAM2Q8IVF5 1701 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 MYH13Q9UKX3 1938 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 PRC1O43663 620 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 ALX1Q15699 326 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 EPB41L4AQ9HCS5 686 aaPredicted RBP19.68■□□□□ 0.74
SH3D21-203ENST00000480549 WDR19Q8NEZ3 1342 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 CACNA1SQ13698 1873 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 FIBPO43427 364 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 PHF14O94880 888 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 MBD4O95243 580 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 TRAPPC3LQ5T215 181 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 MYH15Q9Y2K3 1946 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 SALL1Q9NSC2 1324 aa19.68■□□□□ 0.74
SH3D21-203ENST00000480549 TM4SF1P30408 202 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 FERMT3Q86UX7 667 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 NKX2-3Q8TAU0 364 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 DENND2AQ9ULE3 1009 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 IQSEC3Q9UPP2 1182 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms