RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 CARMIL3Q8ND23 1372 aa15.29■□□□□ 0.04
SEC13-216ENST00000479868 WTIPA6NIX2 430 aaPredicted RBP15.29■□□□□ 0.04
SEC13-216ENST00000479868 RAB11FIP4Q86YS3 637 aa15.29■□□□□ 0.04
SEC13-216ENST00000479868 MBD4O95243 580 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 CYB5R4Q7L1T6 521 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 FUCA2Q9BTY2 467 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
SEC13-216ENST00000479868 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
SEC13-216ENST00000479868 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 WDR19Q8NEZ3 1342 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 GOLGA8BA8MQT2 603 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 ADD1P35611 737 aaKnown RBP15.28■□□□□ 0.04
SEC13-216ENST00000479868 TRDNQ13061 729 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
SEC13-216ENST00000479868 ANKRD18AQ8IVF6 992 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 ARMT1Q9H993 441 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 SRP68Q9UHB9 627 aaKnown RBP15.28■□□□□ 0.04
SEC13-216ENST00000479868 USP21Q9UK80 565 aa15.28■□□□□ 0.04
SEC13-216ENST00000479868 GUCY1B3Q02153 619 aa15.27■□□□□ 0.04
SEC13-216ENST00000479868 PGBD1Q96JS3 809 aa15.27■□□□□ 0.04
SEC13-216ENST00000479868 NEDD4P46934 1319 aa15.27■□□□□ 0.04
SEC13-216ENST00000479868 CHD4Q14839 1912 aa15.27■□□□□ 0.03
SEC13-216ENST00000479868 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.03
SEC13-216ENST00000479868 CLCN1P35523 988 aa15.27■□□□□ 0.03
SEC13-216ENST00000479868 ALX1Q15699 326 aa15.27■□□□□ 0.03
SEC13-216ENST00000479868 IFNL3Q8IZI9 196 aa15.27■□□□□ 0.03
SEC13-216ENST00000479868 FTOQ9C0B1 505 aaKnown RBP eCLIP15.27■□□□□ 0.03
SEC13-216ENST00000479868 INCENPQ9NQS7 918 aa15.27■□□□□ 0.03
SEC13-216ENST00000479868 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.03
SEC13-216ENST00000479868 GOLGA6L4A6NEF3 574 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 B4E1Z4 1266 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 GYG1P46976 350 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 CEBPZQ03701 1054 aaKnown RBP15.26■□□□□ 0.03
SEC13-216ENST00000479868 AMIGO3Q86WK7 504 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 BSDC1Q9NW68 430 aaPredicted RBP15.26■□□□□ 0.03
SEC13-216ENST00000479868 NHSQ6T4R5 1651 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 GNPATO15228 680 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 PRKAB2O43741 272 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
SEC13-216ENST00000479868 RC3H1Q5TC82 1133 aaKnown RBP15.26■□□□□ 0.03
SEC13-216ENST00000479868 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
SEC13-216ENST00000479868 LCORLQ8N3X6 602 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 CELF1Q92879 486 aaKnown RBP15.26■□□□□ 0.03
SEC13-216ENST00000479868 DACT1Q9NYF0 836 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 NARFQ9UHQ1 456 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 CFAP45Q9UL16 551 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 ANGEL1Q9UNK9 670 aaKnown RBP15.26■□□□□ 0.03
SEC13-216ENST00000479868 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
SEC13-216ENST00000479868 ZNF804BA4D1E1 1349 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 ZMYM6O95789 1325 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 RPS6KA4O75676 772 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 CAMK4Q16566 473 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 NAPBQ9H115 298 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 LRP2BPQ9P2M1 347 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 TACC3Q9Y6A5 838 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 SH2B2O14492 632 aaPredicted RBP15.25■□□□□ 0.03
SEC13-216ENST00000479868 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 MIGA1Q8NAN2 632 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 MINPP1Q9UNW1 487 aa15.25■□□□□ 0.03
SEC13-216ENST00000479868 COL1A1P02452 1464 aaPredicted RBP15.24■□□□□ 0.03
SEC13-216ENST00000479868 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
SEC13-216ENST00000479868 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 NUP62CLQ9H1M0 184 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
SEC13-216ENST00000479868 COL24A1Q17RW2 1714 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 RGL2O15211 777 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 UBE4AQ14139 1066 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 ADGRA1Q86SQ6 560 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 CCDC24Q8N4L8 307 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 USP28Q96RU2 1077 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 SETDB2Q96T68 719 aa15.24■□□□□ 0.03
SEC13-216ENST00000479868 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
SEC13-216ENST00000479868 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 CPLX1O14810 134 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 NR1I2O75469 434 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 RXRAP19793 462 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 ZSCAN30Q86W11 494 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 BICD2Q8TD16 824 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 GJB4Q9NTQ9 266 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 ABCF2Q9UG63 623 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
SEC13-216ENST00000479868 ZPR1O75312 459 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 UVSSAQ2YD98 709 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 NBPF5PQ86XG9 351 aaPredicted RBP15.22■□□□□ 0.03
SEC13-216ENST00000479868 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 HS1BP3Q53T59 392 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 C8orf76Q96K31 380 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 NYXQ9GZU5 481 aa15.22■□□□□ 0.03
SEC13-216ENST00000479868 SPATA31A6Q5VVP1 1343 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms