RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PTPN21Q16825 1174 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 CCDC57Q2TAC2 916 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 ISM2Q6H9L7 571 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 PIGBQ92521 554 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 PUS7LQ9H0K6 701 aaKnown RBP15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 LAMA4Q16363 1823 aa15.46■□□□□ 0.06
PDZRN3-208ENST00000479530 PKD1L3Q7Z443 1732 aa15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 FDPSP14324 419 aaKnown RBP15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 EVA1CP58658 441 aa15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 WASHC4Q2M389 1173 aa15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 MRPS27Q92552 414 aaKnown RBP15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 GPR108Q9NPR9 543 aa15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 KIAA1468Q9P260 1216 aa15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 SLAIN2Q9P270 581 aa15.45■□□□□ 0.06
PDZRN3-208ENST00000479530 POLR3DP05423 398 aaPredicted RBP15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 ZNF396Q96N95 335 aaPredicted RBP15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 CARD10Q9BWT7 1032 aa15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 NAT10Q9H0A0 1025 aaKnown RBP15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 DCCP43146 1447 aa15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 RFX7Q2KHR2 1363 aa15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 ATP1A3P13637 1013 aa15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 ARHGAP29Q52LW3 1261 aa15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 TAOK2Q9UL54 1235 aa15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 COL5A2P05997 1499 aaPredicted RBP15.44■□□□□ 0.06
PDZRN3-208ENST00000479530 FGAP02671 866 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 SFPQP23246 707 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 NCAPHQ15003 741 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 IPO4Q8TEX9 1081 aaKnown RBP15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 IMPACTQ9P2X3 320 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 CARMIL3Q8ND23 1372 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 LMOD1P29536 600 aaPredicted RBP15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 IRX5P78411 483 aaPredicted RBP15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 GOLGA8FQ08AF8 430 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 GOLGA8DPQ0D2H9 430 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 TTC39AQ5SRH9 613 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 SLC4A9Q96Q91 983 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 AGXT2Q9BYV1 514 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 TMOD3Q9NYL9 352 aa15.43■□□□□ 0.06
PDZRN3-208ENST00000479530 CIAO1O76071 339 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 PNMA6AP0CW24 399 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 PLA2G4AP47712 749 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 ADALQ6DHV7 355 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 LINC00301Q8NCQ3 95 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 EPC1Q9H2F5 836 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 ATG3Q9NT62 314 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 KIF2AO00139 706 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 SNAP23O00161 211 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 NOL10Q9BSC4 688 aaKnown RBP15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 GREM2Q9H772 168 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 DNAI1Q9UI46 699 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 ABCC6O95255 1503 aa15.42■□□□□ 0.06
PDZRN3-208ENST00000479530 BMS1Q14692 1282 aaKnown RBP15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 HOMER1Q86YM7 354 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 HSD3B7Q9H2F3 369 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 RTEL1Q9NZ71 1219 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 SOS2Q07890 1332 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 ZNF335Q9H4Z2 1342 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 PSDA5PKW4 1024 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 DPF2Q92785 391 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 TJP1Q07157 1748 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 CCDC66A2RUB6 948 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 CCDC150Q8NCX0 1101 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 TRERF1Q96PN7 1200 aa15.41■□□□□ 0.06
PDZRN3-208ENST00000479530 SEC31AO94979 1220 aaKnown RBP15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 STK38Q15208 465 aa15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 SF3A1Q15459 793 aaKnown RBP15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 VGLL3A8MV65 326 aa15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 MCAMP43121 646 aa15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 ANTXR2P58335 489 aa15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 IFIT5Q13325 482 aaKnown RBP15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 ATL3Q6DD88 541 aa15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 HELBQ8NG08 1087 aaPredicted RBP15.4■□□□□ 0.06
PDZRN3-208ENST00000479530 ZNF202O95125 648 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 CSF1RP07333 972 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 CYP2C19P33261 490 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 ETF1P62495 437 aaKnown RBP15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 ZRSR1Q15695 479 aaKnown RBP15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 TRIM65Q6PJ69 517 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 RIPOR2Q9Y4F9 1068 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 TNS2Q63HR2 1409 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 A0A1W2PQ27 194 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 A0A1W2PQ64 194 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 A0A1W2PQD8 194 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 ZRANB2O95218 330 aaKnown RBP eCLIP15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 PCCAP05165 728 aaPredicted RBP15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 SLC3A2P08195 630 aaKnown RBP15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 ITGA6P23229 1130 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 FANCCQ00597 558 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 ZBTB38Q8NAP3 1195 aaPredicted RBP15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 TTLL11Q8NHH1 800 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 NBPF3Q9H094 633 aa15.39■□□□□ 0.05
PDZRN3-208ENST00000479530 HPS5Q9UPZ3 1129 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms