RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 MEGF10Q96KG7 1140 aa9.42□□□□□ -0.9
ITGA4-209ENST00000478440 TCF12Q99081 682 aa9.42□□□□□ -0.9
ITGA4-209ENST00000478440 RNF208Q9H0X6 261 aa9.42□□□□□ -0.9
ITGA4-209ENST00000478440 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
ITGA4-209ENST00000478440 NLRP2Q9NX02 1062 aa9.42□□□□□ -0.9
ITGA4-209ENST00000478440 SOX1O00570 391 aaPredicted RBP9.41□□□□□ -0.9
ITGA4-209ENST00000478440 TM4SF5O14894 197 aa9.41□□□□□ -0.9
ITGA4-209ENST00000478440 ALX3O95076 343 aa9.41□□□□□ -0.9
ITGA4-209ENST00000478440 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
ITGA4-209ENST00000478440 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
ITGA4-209ENST00000478440 ANKRD34AQ69YU3 496 aa9.41□□□□□ -0.9
ITGA4-209ENST00000478440 SLC51AQ86UW1 340 aa9.41□□□□□ -0.9
ITGA4-209ENST00000478440 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
ITGA4-209ENST00000478440 KCNK4Q9NYG8 393 aa9.41□□□□□ -0.9
ITGA4-209ENST00000478440 TREHO43280 583 aa9.4□□□□□ -0.9
ITGA4-209ENST00000478440 NLRP12P59046 1061 aa9.4□□□□□ -0.9
ITGA4-209ENST00000478440 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
ITGA4-209ENST00000478440 KIAA1211Q6ZU35 1233 aa9.4□□□□□ -0.9
ITGA4-209ENST00000478440 RUSC1Q9BVN2 902 aa9.4□□□□□ -0.9
ITGA4-209ENST00000478440 KRTAP4-7Q9BYR0 210 aa9.4□□□□□ -0.9
ITGA4-209ENST00000478440 ADAM11O75078 769 aa9.39□□□□□ -0.91
ITGA4-209ENST00000478440 WISP1O95388 367 aa9.39□□□□□ -0.91
ITGA4-209ENST00000478440 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
ITGA4-209ENST00000478440 AGGF1Q8N302 714 aaeCLIP9.39□□□□□ -0.91
ITGA4-209ENST00000478440 ASB16Q96NS5 453 aa9.39□□□□□ -0.91
ITGA4-209ENST00000478440 MEGF11A6BM72 1044 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 DDX3YO15523 660 aaKnown RBP9.38□□□□□ -0.91
ITGA4-209ENST00000478440 DHX15O43143 795 aaKnown RBP9.38□□□□□ -0.91
ITGA4-209ENST00000478440 SART1O43290 800 aaKnown RBP9.38□□□□□ -0.91
ITGA4-209ENST00000478440 ITPKAP23677 461 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 GRIA4P48058 902 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 GSTM4Q03013 218 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 DSC3Q14574 896 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 FDX2Q6P4F2 183 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 UBASH3BQ8TF42 649 aa9.38□□□□□ -0.91
ITGA4-209ENST00000478440 AQRO60306 1485 aaKnown RBP eCLIP9.38□□□□□ -0.91
ITGA4-209ENST00000478440 TARBP1Q13395 1621 aaKnown RBP9.38□□□□□ -0.91
ITGA4-209ENST00000478440 CYP11A1P05108 521 aa9.37□□□□□ -0.91
ITGA4-209ENST00000478440 RPS26P11Q5JNZ5 115 aaPredicted RBP9.37□□□□□ -0.91
ITGA4-209ENST00000478440 PRR23CQ6ZRP0 262 aa9.37□□□□□ -0.91
ITGA4-209ENST00000478440 FBF1Q8TES7 1133 aa9.37□□□□□ -0.91
ITGA4-209ENST00000478440 USP26Q9BXU7 913 aa9.37□□□□□ -0.91
ITGA4-209ENST00000478440 CYP4F12Q9HCS2 524 aa9.37□□□□□ -0.91
ITGA4-209ENST00000478440 GSC2O15499 205 aa9.36□□□□□ -0.91
ITGA4-209ENST00000478440 XRCC5P13010 732 aaKnown RBP9.36□□□□□ -0.91
ITGA4-209ENST00000478440 HNRNPUQ00839 825 aaKnown RBP eCLIP9.36□□□□□ -0.91
ITGA4-209ENST00000478440 ENOX2Q16206 610 aaKnown RBP9.36□□□□□ -0.91
ITGA4-209ENST00000478440 SPRED3Q2MJR0 410 aa9.36□□□□□ -0.91
ITGA4-209ENST00000478440 PNMA6FA0A0J9YX94 578 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 PRSS36Q5K4E3 855 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 NUTM2GQ5VZR2 741 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 HIF3AQ9Y2N7 669 aa9.35□□□□□ -0.91
ITGA4-209ENST00000478440 ARAP1Q96P48 1450 aa9.34□□□□□ -0.91
ITGA4-209ENST00000478440 B3GALT4O96024 378 aa9.34□□□□□ -0.91
ITGA4-209ENST00000478440 FGD1P98174 961 aa9.34□□□□□ -0.91
ITGA4-209ENST00000478440 EXOSC6Q5RKV6 272 aaKnown RBP9.34□□□□□ -0.91
ITGA4-209ENST00000478440 ALG1LQ6GMV1 187 aa9.34□□□□□ -0.91
ITGA4-209ENST00000478440 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
ITGA4-209ENST00000478440 UTP4Q969X6 686 aaKnown RBP9.34□□□□□ -0.91
ITGA4-209ENST00000478440 FAM46AQ96IP4 442 aaKnown RBP9.34□□□□□ -0.91
ITGA4-209ENST00000478440 UBL7Q96S82 380 aaPredicted RBP9.34□□□□□ -0.91
ITGA4-209ENST00000478440 SUGCTQ9HAC7 445 aa9.34□□□□□ -0.91
ITGA4-209ENST00000478440 ABCB6Q9NP58 842 aa9.34□□□□□ -0.91
ITGA4-209ENST00000478440 RAXQ9Y2V3 346 aa9.34□□□□□ -0.91
ITGA4-209ENST00000478440 POLA1P09884 1462 aaPredicted RBP9.34□□□□□ -0.91
ITGA4-209ENST00000478440 SYNJ1O43426 1573 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 LOC100289279A0A1B0GTE1 492 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 MAPK8P45983 427 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 FMR1Q06787 632 aaKnown RBP eCLIP9.33□□□□□ -0.92
ITGA4-209ENST00000478440 AP3B2Q13367 1082 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 GRM2Q14416 872 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 ZNF423Q2M1K9 1284 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 SRCIN1Q9C0H9 1055 aa9.33□□□□□ -0.92
ITGA4-209ENST00000478440 GIPC1O14908 333 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
ITGA4-209ENST00000478440 HGSNATQ68CP4 663 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 SND1Q7KZF4 910 aaKnown RBP eCLIP9.32□□□□□ -0.92
ITGA4-209ENST00000478440 SMG8Q8ND04 991 aaKnown RBP9.32□□□□□ -0.92
ITGA4-209ENST00000478440 MYRFLQ96LU7 910 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 CORO1BQ9BR76 489 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 TMPRSS13Q9BYE2 586 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 GOLGA2P5Q9HBQ8 144 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 STOML1Q9UBI4 398 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
ITGA4-209ENST00000478440 SOGA1O94964 1423 aa9.31□□□□□ -0.92
ITGA4-209ENST00000478440 POU4F3Q15319 338 aa9.31□□□□□ -0.92
ITGA4-209ENST00000478440 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.31□□□□□ -0.92
ITGA4-209ENST00000478440 BCO2Q9BYV7 579 aa9.31□□□□□ -0.92
ITGA4-209ENST00000478440 TDRD9Q8NDG6 1382 aaKnown RBP9.31□□□□□ -0.92
ITGA4-209ENST00000478440 RAD54L2Q9Y4B4 1467 aa9.31□□□□□ -0.92
ITGA4-209ENST00000478440 PBRM1Q86U86 1689 aa9.31□□□□□ -0.92
ITGA4-209ENST00000478440 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
ITGA4-209ENST00000478440 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.3□□□□□ -0.92
ITGA4-209ENST00000478440 ZMYM1Q5SVZ6 1142 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms