RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 AEBP2Q6ZN18 517 aaPredicted RBP30.9■■■□□ 2.54
ITGA4-209ENST00000478440 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
ITGA4-209ENST00000478440 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
ITGA4-209ENST00000478440 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
ITGA4-209ENST00000478440 POTEDQ86YR6 584 aa25.25■■□□□ 1.63
ITGA4-209ENST00000478440 FOXD1Q16676 465 aa24.9■■□□□ 1.58
ITGA4-209ENST00000478440 MSH5O43196 834 aa23.8■■□□□ 1.4
ITGA4-209ENST00000478440 PLPPR3Q6T4P5 718 aa23.78■■□□□ 1.4
ITGA4-209ENST00000478440 PIAS4Q8N2W9 510 aaPredicted RBP22.98■■□□□ 1.27
ITGA4-209ENST00000478440 ADRA2BP18089 450 aa22.66■■□□□ 1.22
ITGA4-209ENST00000478440 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
ITGA4-209ENST00000478440 CACNB1Q02641 598 aaPredicted RBP21.14■□□□□ 0.97
ITGA4-209ENST00000478440 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
ITGA4-209ENST00000478440 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
ITGA4-209ENST00000478440 PPP4R3CPQ6ZMV5 832 aa20.85■□□□□ 0.93
ITGA4-209ENST00000478440 MAPK8IP2Q13387 824 aaPredicted RBP20.75■□□□□ 0.91
ITGA4-209ENST00000478440 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
ITGA4-209ENST00000478440 CNKSR2Q8WXI2 1034 aa20.38■□□□□ 0.85
ITGA4-209ENST00000478440 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
ITGA4-209ENST00000478440 DCAF8L1A6NGE4 600 aa20.07■□□□□ 0.8
ITGA4-209ENST00000478440 KCNA4P22459 653 aa20.06■□□□□ 0.8
ITGA4-209ENST00000478440 RNF216Q9NWF9 866 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-209ENST00000478440 HOXD11P31277 338 aaPredicted RBP19.97■□□□□ 0.79
ITGA4-209ENST00000478440 NPM3O75607 178 aaKnown RBP19.92■□□□□ 0.78
ITGA4-209ENST00000478440 C1QBPQ07021 282 aaKnown RBP19.82■□□□□ 0.76
ITGA4-209ENST00000478440 POTEHQ6S545 545 aa19.56■□□□□ 0.72
ITGA4-209ENST00000478440 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
ITGA4-209ENST00000478440 SLC4A1APQ9BWU0 796 aaKnown RBP19.16■□□□□ 0.66
ITGA4-209ENST00000478440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.64
ITGA4-209ENST00000478440 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
ITGA4-209ENST00000478440 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
ITGA4-209ENST00000478440 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
ITGA4-209ENST00000478440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
ITGA4-209ENST00000478440 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
ITGA4-209ENST00000478440 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
ITGA4-209ENST00000478440 DSG3P32926 999 aa18.49■□□□□ 0.55
ITGA4-209ENST00000478440 APLP2Q06481 763 aa18.47■□□□□ 0.55
ITGA4-209ENST00000478440 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
ITGA4-209ENST00000478440 ZBTB22O15209 634 aa18.38■□□□□ 0.53
ITGA4-209ENST00000478440 CAPN15O75808 1086 aa18.3■□□□□ 0.52
ITGA4-209ENST00000478440 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
ITGA4-209ENST00000478440 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
ITGA4-209ENST00000478440 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
ITGA4-209ENST00000478440 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
ITGA4-209ENST00000478440 ATXN8OSP0DMR3 200 aa18.08■□□□□ 0.48
ITGA4-209ENST00000478440 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
ITGA4-209ENST00000478440 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.44
ITGA4-209ENST00000478440 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
ITGA4-209ENST00000478440 SP7Q8TDD2 431 aaPredicted RBP17.77■□□□□ 0.44
ITGA4-209ENST00000478440 ABCB7O75027 752 aa17.76■□□□□ 0.43
ITGA4-209ENST00000478440 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
ITGA4-209ENST00000478440 POLA2Q14181 598 aa17.68■□□□□ 0.42
ITGA4-209ENST00000478440 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
ITGA4-209ENST00000478440 FBLN2P98095 1184 aa17.36■□□□□ 0.37
ITGA4-209ENST00000478440 HAX1O00165 279 aa17.1■□□□□ 0.33
ITGA4-209ENST00000478440 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
ITGA4-209ENST00000478440 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
ITGA4-209ENST00000478440 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
ITGA4-209ENST00000478440 AKT1S1Q96B36 256 aa17.02■□□□□ 0.32
ITGA4-209ENST00000478440 SPDYE2BA6NHP3 402 aa16.99■□□□□ 0.31
ITGA4-209ENST00000478440 SPDYE6P0CI01 402 aa16.99■□□□□ 0.31
ITGA4-209ENST00000478440 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
ITGA4-209ENST00000478440 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
ITGA4-209ENST00000478440 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
ITGA4-209ENST00000478440 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
ITGA4-209ENST00000478440 EVX2Q03828 476 aa16.78■□□□□ 0.28
ITGA4-209ENST00000478440 SSUH2Q9Y2M2 353 aa16.76■□□□□ 0.27
ITGA4-209ENST00000478440 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
ITGA4-209ENST00000478440 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
ITGA4-209ENST00000478440 LHX8Q68G74 356 aa16.65■□□□□ 0.26
ITGA4-209ENST00000478440 PLSCR2Q9NRY7 297 aa16.6■□□□□ 0.25
ITGA4-209ENST00000478440 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
ITGA4-209ENST00000478440 SPDYE1Q8NFV5 336 aaPredicted RBP16.55■□□□□ 0.24
ITGA4-209ENST00000478440 FKBP8Q14318 412 aa16.5■□□□□ 0.23
ITGA4-209ENST00000478440 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
ITGA4-209ENST00000478440 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
ITGA4-209ENST00000478440 PROM2Q8N271 834 aa16.38■□□□□ 0.21
ITGA4-209ENST00000478440 GABBR2O75899 941 aa16.35■□□□□ 0.21
ITGA4-209ENST00000478440 C19orf67A6NJJ6 358 aa16.3■□□□□ 0.2
ITGA4-209ENST00000478440 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
ITGA4-209ENST00000478440 PRKAR2AP13861 404 aaKnown RBP16.24■□□□□ 0.19
ITGA4-209ENST00000478440 FBXO3Q9UK99 471 aa16.13■□□□□ 0.17
ITGA4-209ENST00000478440 PLEKHG5O94827 1062 aa16■□□□□ 0.15
ITGA4-209ENST00000478440 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
ITGA4-209ENST00000478440 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
ITGA4-209ENST00000478440 CREBZFQ9NS37 354 aa15.93■□□□□ 0.14
ITGA4-209ENST00000478440 MIER1Q8N108 512 aa15.9■□□□□ 0.14
ITGA4-209ENST00000478440 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
ITGA4-209ENST00000478440 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
ITGA4-209ENST00000478440 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
ITGA4-209ENST00000478440 ZBTB47Q9UFB7 747 aaPredicted RBP15.83■□□□□ 0.12
ITGA4-209ENST00000478440 VASPP50552 380 aaPredicted RBP15.79■□□□□ 0.12
ITGA4-209ENST00000478440 POTEMA6NI47 508 aa15.74■□□□□ 0.11
ITGA4-209ENST00000478440 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
ITGA4-209ENST00000478440 CLCN6P51797 869 aa15.71■□□□□ 0.11
ITGA4-209ENST00000478440 DCBLD2Q96PD2 775 aa15.67■□□□□ 0.1
ITGA4-209ENST00000478440 CD44P16070 742 aaKnown RBP15.66■□□□□ 0.1
ITGA4-209ENST00000478440 POTEGQ6S5H5 508 aa15.65■□□□□ 0.1
ITGA4-209ENST00000478440 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
ITGA4-209ENST00000478440 OTUD5Q96G74 571 aa15.63■□□□□ 0.09
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