RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 P4HBP07237 508 aaKnown RBP9.42□□□□□ -0.9
PRPF40A-206ENST00000471167 EXOSC6Q5RKV6 272 aaKnown RBP9.42□□□□□ -0.9
PRPF40A-206ENST00000471167 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
PRPF40A-206ENST00000471167 TRIM42Q8IWZ5 723 aa9.42□□□□□ -0.9
PRPF40A-206ENST00000471167 STK35Q8TDR2 534 aa9.42□□□□□ -0.9
PRPF40A-206ENST00000471167 RNF19AQ9NV58 838 aa9.42□□□□□ -0.9
PRPF40A-206ENST00000471167 HMX2A2RU54 273 aa9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 MAPK8P45983 427 aa9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 FCGRTP55899 365 aa9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 RPS26P11Q5JNZ5 115 aaPredicted RBP9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 XP32Q5T750 250 aa9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 C7orf69Q9H7B7 122 aa9.41□□□□□ -0.9
PRPF40A-206ENST00000471167 BMP3P12645 472 aa9.4□□□□□ -0.9
PRPF40A-206ENST00000471167 POU4F3Q15319 338 aa9.4□□□□□ -0.9
PRPF40A-206ENST00000471167 C2CD4AQ8NCU7 369 aaPredicted RBP9.4□□□□□ -0.9
PRPF40A-206ENST00000471167 TRAK1Q9UPV9 953 aa9.4□□□□□ -0.9
PRPF40A-206ENST00000471167 DHX15O43143 795 aaKnown RBP9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 SGO2Q562F6 1265 aa9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 NUTM2GQ5VZR2 741 aa9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 SND1Q7KZF4 910 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 ZSCAN29Q8IWY8 852 aaPredicted RBP9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 SHISA5Q8N114 240 aa9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 WDR89Q96FK6 387 aaPredicted RBP9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 NLRP2Q9NX02 1062 aa9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 STOML1Q9UBI4 398 aa9.39□□□□□ -0.91
PRPF40A-206ENST00000471167 CDPF1Q6NVV7 123 aa9.38□□□□□ -0.91
PRPF40A-206ENST00000471167 FDX2Q6P4F2 183 aa9.38□□□□□ -0.91
PRPF40A-206ENST00000471167 SOX4Q06945 474 aaPredicted RBP9.37□□□□□ -0.91
PRPF40A-206ENST00000471167 DNAJC14Q6Y2X3 702 aaPredicted RBP9.37□□□□□ -0.91
PRPF40A-206ENST00000471167 DTHD1Q6ZMT9 781 aa9.37□□□□□ -0.91
PRPF40A-206ENST00000471167 PDZD3Q86UT5 571 aa9.37□□□□□ -0.91
PRPF40A-206ENST00000471167 FAM83CQ9BQN1 747 aa9.37□□□□□ -0.91
PRPF40A-206ENST00000471167 MED26O95402 600 aa9.36□□□□□ -0.91
PRPF40A-206ENST00000471167 CYP11A1P05108 521 aa9.36□□□□□ -0.91
PRPF40A-206ENST00000471167 BEND4Q6ZU67 534 aa9.36□□□□□ -0.91
PRPF40A-206ENST00000471167 CLEC10AQ8IUN9 316 aa9.36□□□□□ -0.91
PRPF40A-206ENST00000471167 FBF1Q8TES7 1133 aa9.36□□□□□ -0.91
PRPF40A-206ENST00000471167 CCDC86Q9H6F5 360 aaKnown RBP9.36□□□□□ -0.91
PRPF40A-206ENST00000471167 ZNF862O60290 1169 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 ADH5P11766 374 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 ZDHHC13Q8IUH4 622 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 WDR18Q9BV38 432 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 GSX1Q9H4S2 264 aaPredicted RBP9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 CYP4F12Q9HCS2 524 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 PPP1R9AQ9ULJ8 1098 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 RNF112Q9ULX5 631 aa9.35□□□□□ -0.91
PRPF40A-206ENST00000471167 PRR19A6NJB7 356 aa9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 SART1O43290 800 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 MAP4P27816 1152 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 NFIAQ12857 509 aa9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 ZC3H12CQ9C0D7 883 aaKnown RBP9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 ACTL7BQ9Y614 415 aa9.34□□□□□ -0.91
PRPF40A-206ENST00000471167 ANKRD33BA6NCL7 494 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 HYAL3O43820 417 aaPredicted RBP9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 AOC2O75106 756 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 LIG1P18858 919 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 ARTNQ5T4W7 220 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 RASIP1Q5U651 963 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 ALG1LQ6GMV1 187 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 FBLIM1Q8WUP2 373 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 AKAP2Q9Y2D5 859 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 HIF3AQ9Y2N7 669 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 PCDHGC5Q9Y5F6 944 aa9.33□□□□□ -0.92
PRPF40A-206ENST00000471167 ENC1O14682 589 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 PAGE1O75459 146 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 AP3B2Q13367 1082 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 SLC51AQ86UW1 340 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 NPAS4Q8IUM7 802 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 EZH1Q92800 747 aaPredicted RBP9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 NECAB3Q96P71 396 aaPredicted RBP9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 CORO1BQ9BR76 489 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 KCNF1Q9H3M0 494 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 FAM105AQ9NUU6 356 aa9.32□□□□□ -0.92
PRPF40A-206ENST00000471167 TGFB1P01137 390 aa9.31□□□□□ -0.92
PRPF40A-206ENST00000471167 LDHBP07195 334 aaKnown RBP9.31□□□□□ -0.92
PRPF40A-206ENST00000471167 XRCC5P13010 732 aaKnown RBP9.31□□□□□ -0.92
PRPF40A-206ENST00000471167 AKAP4Q5JQC9 854 aa9.31□□□□□ -0.92
PRPF40A-206ENST00000471167 GATA6Q92908 595 aa9.31□□□□□ -0.92
PRPF40A-206ENST00000471167 TMEM39AQ9NV64 488 aa9.31□□□□□ -0.92
PRPF40A-206ENST00000471167 CACNA2D2Q9NY47 1150 aa9.31□□□□□ -0.92
PRPF40A-206ENST00000471167 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
PRPF40A-206ENST00000471167 FBXO24O75426 580 aa9.3□□□□□ -0.92
PRPF40A-206ENST00000471167 GSTP1P09211 210 aaKnown RBP9.3□□□□□ -0.92
PRPF40A-206ENST00000471167 BMP6P22004 513 aa9.3□□□□□ -0.92
PRPF40A-206ENST00000471167 ADMP35318 185 aa9.3□□□□□ -0.92
PRPF40A-206ENST00000471167 ZNF252P-AS1Q0IIN9 211 aa9.3□□□□□ -0.92
PRPF40A-206ENST00000471167 TMPRSS2O15393 492 aa9.29□□□□□ -0.92
PRPF40A-206ENST00000471167 GAS2O43903 313 aaKnown RBP9.29□□□□□ -0.92
PRPF40A-206ENST00000471167 TAGLNQ01995 201 aaKnown RBP9.29□□□□□ -0.92
PRPF40A-206ENST00000471167 SEZ6L2Q6UXD5 910 aa9.29□□□□□ -0.92
PRPF40A-206ENST00000471167 GRIN3AQ8TCU5 1115 aa9.29□□□□□ -0.92
PRPF40A-206ENST00000471167 ACSS3Q9H6R3 686 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms