RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ERCC4Q92889 916 aaPredicted RBP17.17■□□□□ 0.34
CBWD3-205ENST00000469687 ZNF396Q96N95 335 aaPredicted RBP17.17■□□□□ 0.34
CBWD3-205ENST00000469687 COL22A1Q8NFW1 1626 aaPredicted RBP17.17■□□□□ 0.34
CBWD3-205ENST00000469687 CHD4Q14839 1912 aa17.17■□□□□ 0.34
CBWD3-205ENST00000469687 COL4A1P02462 1669 aa17.17■□□□□ 0.34
CBWD3-205ENST00000469687 NEDD4P46934 1319 aa17.17■□□□□ 0.34
CBWD3-205ENST00000469687 B4E1Z4 1266 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 RASGRF1Q13972 1273 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 NOLC1Q14978 699 aaKnown RBP eCLIP17.16■□□□□ 0.34
CBWD3-205ENST00000469687 AIFM3Q96NN9 605 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 PCDHA7Q9UN72 937 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 MROH5Q6ZUA9 1318 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 CPLX1O14810 134 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 ITPK1Q13572 414 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 C11orf57Q6ZUT1 292 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-205ENST00000469687 FSIP1Q8NA03 581 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 ENGASEQ8NFI3 743 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
CBWD3-205ENST00000469687 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 PYCARDQ9ULZ3 195 aa17.16■□□□□ 0.34
CBWD3-205ENST00000469687 UQCRFS1P1P0C7P4 283 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 TRDNQ13061 729 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 EPB41L4AQ9HCS5 686 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-205ENST00000469687 ECM29Q5VYK3 1845 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 DDB1Q16531 1140 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-205ENST00000469687 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
CBWD3-205ENST00000469687 AIDAQ96BJ3 306 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 MPHOSPH8Q99549 860 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 ANGEL1Q9UNK9 670 aaKnown RBP17.15■□□□□ 0.34
CBWD3-205ENST00000469687 TACC3Q9Y6A5 838 aa17.15■□□□□ 0.34
CBWD3-205ENST00000469687 UQCRHLA0A096LP55 91 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 LOC102724428A0A0B4J2F2 783 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 DHX16O60231 1041 aaKnown RBP17.14■□□□□ 0.33
CBWD3-205ENST00000469687 UQCRHP07919 91 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 TERF1P54274 439 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 SIK1P57059 783 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 CCDC73Q6ZRK6 1079 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 CCDC144CPQ8IYA2 1237 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 UTP14AQ9BVJ6 771 aaKnown RBP17.14■□□□□ 0.33
CBWD3-205ENST00000469687 RTEL1Q9NZ71 1219 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 AHDC1Q5TGY3 1603 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-205ENST00000469687 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 WDR19Q8NEZ3 1342 aa17.14■□□□□ 0.33
CBWD3-205ENST00000469687 A0A1B0GVL5 298 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 SH2B2O14492 632 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-205ENST00000469687 SLC5A1P13866 664 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 PTGS1P23219 599 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 CDC27P30260 824 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 LINC00301Q8NCQ3 95 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 TAF1P21675 1872 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 MBD4O95243 580 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 BCAMP50895 628 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 CTDSPL2Q05D32 466 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 ARMT1Q9H993 441 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 NRBP1Q9UHY1 535 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
CBWD3-205ENST00000469687 KINO60870 393 aaKnown RBP17.12■□□□□ 0.33
CBWD3-205ENST00000469687 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.33
CBWD3-205ENST00000469687 IQCB1Q15051 598 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 DNTTIP2Q5QJE6 756 aaKnown RBP17.12■□□□□ 0.33
CBWD3-205ENST00000469687 APOA5Q6Q788 366 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 PLA2G4DQ86XP0 818 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 PHKBQ93100 1093 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
CBWD3-205ENST00000469687 UBE2Q2LH0YL09 131 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 PRKAB2O43741 272 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 ZNF75DP51815 510 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 NDUFA8P51970 172 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 KIF23Q02241 960 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-205ENST00000469687 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 IFNL3Q8IZI9 196 aa17.12■□□□□ 0.33
CBWD3-205ENST00000469687 FMR1NBQ8N0W7 255 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-205ENST00000469687 NTSR2O95665 410 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 STK38Q15208 465 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 ADALQ6DHV7 355 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 KIAA1524Q8TCG1 905 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 IGDCC4Q8TDY8 1250 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 MRPS27Q92552 414 aaKnown RBP17.11■□□□□ 0.33
CBWD3-205ENST00000469687 FBXW7Q969H0 707 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 AK7Q96M32 723 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 WTIPA6NIX2 430 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-205ENST00000469687 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 STK11IPQ8N1F8 1099 aa17.11■□□□□ 0.33
CBWD3-205ENST00000469687 SPTLC3Q9NUV7 552 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms