RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 TMC4Q7Z404 712 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 BSNDQ8WZ55 320 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 WNT8BQ93098 351 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 KRTAP4-8Q9BYQ9 185 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 NPHS2Q9NP85 383 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 NLRP2Q9NX02 1062 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 SPG7Q9UQ90 795 aa9.07□□□□□ -0.96
UBE3C-204ENST00000469336 GIPC1O14908 333 aa9.06□□□□□ -0.96
UBE3C-204ENST00000469336 DHX15O43143 795 aaKnown RBP9.06□□□□□ -0.96
UBE3C-204ENST00000469336 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
UBE3C-204ENST00000469336 IKBKEQ14164 716 aa9.06□□□□□ -0.96
UBE3C-204ENST00000469336 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
UBE3C-204ENST00000469336 KIAA0319Q5VV43 1072 aa9.06□□□□□ -0.96
UBE3C-204ENST00000469336 EPS8L3Q8TE67 593 aaKnown RBP9.06□□□□□ -0.96
UBE3C-204ENST00000469336 MRRFQ96E11 262 aaKnown RBP9.06□□□□□ -0.96
UBE3C-204ENST00000469336 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
UBE3C-204ENST00000469336 C7orf69Q9H7B7 122 aa9.06□□□□□ -0.96
UBE3C-204ENST00000469336 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
UBE3C-204ENST00000469336 E9PSI1 815 aa9.05□□□□□ -0.96
UBE3C-204ENST00000469336 MED26O95402 600 aa9.05□□□□□ -0.96
UBE3C-204ENST00000469336 TGFB1P01137 390 aa9.05□□□□□ -0.96
UBE3C-204ENST00000469336 IGLV1-40P01703 118 aa9.05□□□□□ -0.96
UBE3C-204ENST00000469336 MRPL58Q14197 206 aaKnown RBP9.05□□□□□ -0.96
UBE3C-204ENST00000469336 MYRFLQ96LU7 910 aa9.05□□□□□ -0.96
UBE3C-204ENST00000469336 SART1O43290 800 aaKnown RBP9.04□□□□□ -0.96
UBE3C-204ENST00000469336 DLGAP3O95886 979 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 ARL4DP49703 201 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 PSMD2Q13200 908 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 PI16Q6UXB8 463 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 PSMG3-AS1Q96PY0 264 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 USP26Q9BXU7 913 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 RNF208Q9H0X6 261 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 RNF19AQ9NV58 838 aa9.04□□□□□ -0.96
UBE3C-204ENST00000469336 A0A1W2PP55 124 aa9.03□□□□□ -0.96
UBE3C-204ENST00000469336 BMP3P12645 472 aa9.03□□□□□ -0.96
UBE3C-204ENST00000469336 SRCIN1Q9C0H9 1055 aa9.03□□□□□ -0.96
UBE3C-204ENST00000469336 BHLHE41Q9C0J9 482 aaPredicted RBP9.03□□□□□ -0.96
UBE3C-204ENST00000469336 KCNF1Q9H3M0 494 aa9.03□□□□□ -0.96
UBE3C-204ENST00000469336 PCMTD2Q9NV79 361 aa9.03□□□□□ -0.96
UBE3C-204ENST00000469336 AK5Q9Y6K8 562 aa9.03□□□□□ -0.96
UBE3C-204ENST00000469336 SORBS3O60504 671 aa9.02□□□□□ -0.97
UBE3C-204ENST00000469336 GADD45BO75293 160 aaPredicted RBP9.02□□□□□ -0.97
UBE3C-204ENST00000469336 ESRRAP11474 423 aaPredicted RBP9.02□□□□□ -0.97
UBE3C-204ENST00000469336 NFIAQ12857 509 aa9.02□□□□□ -0.97
UBE3C-204ENST00000469336 UVSSAQ2YD98 709 aa9.02□□□□□ -0.97
UBE3C-204ENST00000469336 FAM20CQ8IXL6 584 aa9.02□□□□□ -0.97
UBE3C-204ENST00000469336 C12orf49Q9H741 205 aa9.02□□□□□ -0.97
UBE3C-204ENST00000469336 MRS2Q9HD23 443 aa9.02□□□□□ -0.97
UBE3C-204ENST00000469336 SPRED3Q2MJR0 410 aa9.01□□□□□ -0.97
UBE3C-204ENST00000469336 ANKRD34AQ69YU3 496 aa9.01□□□□□ -0.97
UBE3C-204ENST00000469336 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
UBE3C-204ENST00000469336 FDX2Q6P4F2 183 aa9.01□□□□□ -0.97
UBE3C-204ENST00000469336 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.01□□□□□ -0.97
UBE3C-204ENST00000469336 FAM161BQ96MY7 647 aa9.01□□□□□ -0.97
UBE3C-204ENST00000469336 TRAK1Q9UPV9 953 aa9.01□□□□□ -0.97
UBE3C-204ENST00000469336 LOC100289279A0A1B0GTE1 492 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 EIF4BP23588 611 aaKnown RBP9□□□□□ -0.97
UBE3C-204ENST00000469336 GRIA4P48058 902 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 GSTM4Q03013 218 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 GRM2Q14416 872 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 SGO2Q562F6 1265 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 BEND4Q6ZU67 534 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 ZDHHC13Q8IUH4 622 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 BCO2Q9BYV7 579 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 OSBPL7Q9BZF2 842 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 EHD4Q9H223 541 aa9□□□□□ -0.97
UBE3C-204ENST00000469336 RECKO95980 971 aa8.99□□□□□ -0.97
UBE3C-204ENST00000469336 CD97P48960 835 aa8.99□□□□□ -0.97
UBE3C-204ENST00000469336 RNF43Q68DV7 783 aa8.99□□□□□ -0.97
UBE3C-204ENST00000469336 C12orf50Q8NA57 414 aaPredicted RBP8.99□□□□□ -0.97
UBE3C-204ENST00000469336 TCF12Q99081 682 aa8.99□□□□□ -0.97
UBE3C-204ENST00000469336 FAM83CQ9BQN1 747 aa8.99□□□□□ -0.97
UBE3C-204ENST00000469336 LIN7BQ9HAP6 207 aa8.99□□□□□ -0.97
UBE3C-204ENST00000469336 VTI1BQ9UEU0 232 aa8.99□□□□□ -0.97
UBE3C-204ENST00000469336 A0A096LPE4 126 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 A0A1W2PPZ6 126 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 DRD2P14416 443 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 ZNF423Q2M1K9 1284 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 SLC51AQ86UW1 340 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 CLEC10AQ8IUN9 316 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 CCNJLQ8IV13 435 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 GLIS3Q8NEA6 775 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 CRELD1Q96HD1 420 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 TMPRSS13Q9BYE2 586 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 FAM8A1Q9UBU6 413 aa8.98□□□□□ -0.97
UBE3C-204ENST00000469336 MEGF11A6BM72 1044 aa8.97□□□□□ -0.97
UBE3C-204ENST00000469336 GSC2O15499 205 aa8.97□□□□□ -0.97
UBE3C-204ENST00000469336 GAS2O43903 313 aaKnown RBP8.97□□□□□ -0.97
UBE3C-204ENST00000469336 CTSBP07858 339 aa8.97□□□□□ -0.97
UBE3C-204ENST00000469336 NUTM2GQ5VZR2 741 aa8.97□□□□□ -0.97
UBE3C-204ENST00000469336 NXPE4Q6UWF7 544 aa8.97□□□□□ -0.97
UBE3C-204ENST00000469336 SHKBP1Q8TBC3 707 aa8.97□□□□□ -0.97
UBE3C-204ENST00000469336 ABCB6Q9NP58 842 aa8.97□□□□□ -0.97
UBE3C-204ENST00000469336 PRR19A6NJB7 356 aa8.96□□□□□ -0.98
UBE3C-204ENST00000469336 MAP4P27816 1152 aaKnown RBP8.96□□□□□ -0.98
UBE3C-204ENST00000469336 SHISA5Q8N114 240 aa8.96□□□□□ -0.98
UBE3C-204ENST00000469336 DBNDD2Q9BQY9 259 aa8.96□□□□□ -0.98
UBE3C-204ENST00000469336 SOX17Q9H6I2 414 aaPredicted RBP8.96□□□□□ -0.98
UBE3C-204ENST00000469336 PPP4R2Q9NY27 417 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms