RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 CCDC93Q567U6 631 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 KRT222Q8N1A0 295 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 ERCC4Q92889 916 aaPredicted RBP16.84■□□□□ 0.29
SEC16A-208ENST00000467838 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 TOM1O60784 492 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
SEC16A-208ENST00000467838 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
SEC16A-208ENST00000467838 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
SEC16A-208ENST00000467838 LRRC24Q50LG9 513 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 FBXO38Q6PIJ6 1188 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
SEC16A-208ENST00000467838 TRMT1Q9NXH9 659 aaKnown RBP16.84■□□□□ 0.29
SEC16A-208ENST00000467838 ATRNO75882 1429 aa16.83■□□□□ 0.29
SEC16A-208ENST00000467838 ZNF202O95125 648 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.28
SEC16A-208ENST00000467838 ANTXR2P58335 489 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 TPM4P67936 248 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 ELF2Q15723 593 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 ANO1Q5XXA6 986 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 PRDM11Q9NQV5 511 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 GPHNQ9NQX3 736 aaPredicted RBP16.83■□□□□ 0.28
SEC16A-208ENST00000467838 IFNKQ9P0W0 207 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 ORC3Q9UBD5 711 aaPredicted RBP16.83■□□□□ 0.28
SEC16A-208ENST00000467838 TUBE1Q9UJT0 475 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 NAP1L2Q9ULW6 460 aaPredicted RBP16.83■□□□□ 0.28
SEC16A-208ENST00000467838 MROH7-TTC4A0A0A0MT08 1334 aa16.83■□□□□ 0.28
SEC16A-208ENST00000467838 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 KIF28PB7ZC32 967 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 PRC1O43663 620 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 H2AFXP16104 143 aaPredicted RBP16.82■□□□□ 0.28
SEC16A-208ENST00000467838 SF3A1Q15459 793 aaKnown RBP16.82■□□□□ 0.28
SEC16A-208ENST00000467838 ZRSR1Q15695 479 aaKnown RBP16.82■□□□□ 0.28
SEC16A-208ENST00000467838 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 SLFN14P0C7P3 912 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 PFKFB1P16118 471 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 CABP4P57796 275 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 FAM193AP78312 1265 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 PIP4K2BP78356 416 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 OTUD7BQ6GQQ9 843 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 TMC6Q7Z403 805 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 HSD3B7Q9H2F3 369 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 HPSEQ9Y251 543 aa16.82■□□□□ 0.28
SEC16A-208ENST00000467838 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
SEC16A-208ENST00000467838 MYO1BO43795 1136 aa16.81■□□□□ 0.28
SEC16A-208ENST00000467838 SMC2O95347 1197 aa16.81■□□□□ 0.28
SEC16A-208ENST00000467838 SLC39A14Q15043 492 aa16.81■□□□□ 0.28
SEC16A-208ENST00000467838 TTLL7Q6ZT98 887 aa16.81■□□□□ 0.28
SEC16A-208ENST00000467838 APPBP2Q92624 585 aa16.81■□□□□ 0.28
SEC16A-208ENST00000467838 TNS2Q63HR2 1409 aa16.81■□□□□ 0.28
SEC16A-208ENST00000467838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
SEC16A-208ENST00000467838 CCP110O43303 1012 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 NRDCO43847 1150 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 FGAP02671 866 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 NCOA7Q8NI08 942 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 PHLPP2Q6ZVD8 1323 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 POLR3DP05423 398 aaPredicted RBP16.8■□□□□ 0.28
SEC16A-208ENST00000467838 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
SEC16A-208ENST00000467838 PPP6R2O75170 966 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 ZMYM6O95789 1325 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 FANCCQ00597 558 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 SYNE3Q6ZMZ3 975 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
SEC16A-208ENST00000467838 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 CEP126Q9P2H0 1117 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 MAP3K15Q6ZN16 1313 aa16.79■□□□□ 0.28
SEC16A-208ENST00000467838 WDHD1O75717 1129 aaPredicted RBP16.78■□□□□ 0.28
SEC16A-208ENST00000467838 TERF2Q15554 542 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 TAF3Q5VWG9 929 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
SEC16A-208ENST00000467838 ZNF446Q9NWS9 450 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 UBAP1LF5GYI3 381 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 FBXW7Q969H0 707 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 ISCA1Q9BUE6 129 aa16.78■□□□□ 0.28
SEC16A-208ENST00000467838 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.78■□□□□ 0.28
SEC16A-208ENST00000467838 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.78■□□□□ 0.28
SEC16A-208ENST00000467838 V9GYY5 206 aaPredicted RBP16.78■□□□□ 0.28
SEC16A-208ENST00000467838 CPLX1O14810 134 aa16.77■□□□□ 0.28
SEC16A-208ENST00000467838 CBFA2T2O43439 604 aa16.77■□□□□ 0.28
SEC16A-208ENST00000467838 HAND2P61296 217 aa16.77■□□□□ 0.28
SEC16A-208ENST00000467838 ETF1P62495 437 aaKnown RBP16.77■□□□□ 0.28
SEC16A-208ENST00000467838 PTPAQ15257 358 aa16.77■□□□□ 0.28
SEC16A-208ENST00000467838 TTC39AQ5SRH9 613 aa16.77■□□□□ 0.28
SEC16A-208ENST00000467838 RALYLQ86SE5 291 aaKnown RBP16.77■□□□□ 0.28
SEC16A-208ENST00000467838 XAGE2Q96GT9 111 aa16.77■□□□□ 0.28
SEC16A-208ENST00000467838 PLA2G12BQ9BX93 195 aa16.77■□□□□ 0.28
SEC16A-208ENST00000467838 COL16A1Q07092 1604 aaPredicted RBP16.77■□□□□ 0.28
SEC16A-208ENST00000467838 COL22A1Q8NFW1 1626 aaPredicted RBP16.77■□□□□ 0.28
SEC16A-208ENST00000467838 LRP6O75581 1613 aa16.77■□□□□ 0.27
SEC16A-208ENST00000467838 ADORA1P30542 326 aa16.77■□□□□ 0.27
SEC16A-208ENST00000467838 MYL5Q02045 173 aa16.77■□□□□ 0.27
SEC16A-208ENST00000467838 SYT10Q6XYQ8 523 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms