RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 LIN7BQ9HAP6 207 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 LATS2Q9NRM7 1088 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 SMARCA2P51531 1590 aa6.01□□□□□ -1.45
SCN3A-206ENST00000465043 CARNS1A5YM72 827 aa6□□□□□ -1.45
SCN3A-206ENST00000465043 CPNE3O75131 537 aaKnown RBP6□□□□□ -1.45
SCN3A-206ENST00000465043 MAP4P27816 1152 aaKnown RBP6□□□□□ -1.45
SCN3A-206ENST00000465043 USP11P51784 963 aa6□□□□□ -1.45
SCN3A-206ENST00000465043 HNRNPUQ00839 825 aaKnown RBP eCLIP6□□□□□ -1.45
SCN3A-206ENST00000465043 PCDH1Q08174 1060 aa6□□□□□ -1.45
SCN3A-206ENST00000465043 KIAA0319Q5VV43 1072 aa6□□□□□ -1.45
SCN3A-206ENST00000465043 DNAJC25Q9H1X3 360 aa6□□□□□ -1.45
SCN3A-206ENST00000465043 BAZ1BQ9UIG0 1483 aaKnown RBP6□□□□□ -1.45
SCN3A-206ENST00000465043 PEG3Q9GZU2 1588 aa6□□□□□ -1.45
SCN3A-206ENST00000465043 TGFB1P01137 390 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 RXRBP28702 533 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 SERPINB4P48594 390 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 ARHGAP4P98171 946 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 PTPN12Q05209 780 aaKnown RBP5.99□□□□□ -1.45
SCN3A-206ENST00000465043 PAOXQ6QHF9 649 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 DMRTB1Q96MA1 342 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 FAM129BQ96TA1 746 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 TCF12Q99081 682 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 ATG3Q9NT62 314 aa5.99□□□□□ -1.45
SCN3A-206ENST00000465043 POLR3DP05423 398 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-206ENST00000465043 HGSNATQ68CP4 663 aa5.98□□□□□ -1.45
SCN3A-206ENST00000465043 TXNDC2Q86VQ3 553 aa5.98□□□□□ -1.45
SCN3A-206ENST00000465043 SHKBP1Q8TBC3 707 aa5.98□□□□□ -1.45
SCN3A-206ENST00000465043 METTL22Q9BUU2 404 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-206ENST00000465043 TRAK1Q9UPV9 953 aa5.98□□□□□ -1.45
SCN3A-206ENST00000465043 FAM95CA0A1B0GW59 222 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 PRR19A6NJB7 356 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 B3GALT4O96024 378 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 ITPKAP23677 461 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 SOX4Q06945 474 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-206ENST00000465043 AP3B2Q13367 1082 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 POU4F3Q15319 338 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 ECM1Q16610 540 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 RPS26P11Q5JNZ5 115 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-206ENST00000465043 TMC1Q8TDI8 760 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 CORO1BQ9BR76 489 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 NRSN2Q9GZP1 204 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 EHD4Q9H223 541 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 PIM2Q9P1W9 311 aa5.97□□□□□ -1.45
SCN3A-206ENST00000465043 NCAPD3P42695 1498 aa5.96□□□□□ -1.45
SCN3A-206ENST00000465043 CC2D2AQ9P2K1 1620 aa5.96□□□□□ -1.45
SCN3A-206ENST00000465043 METTL12A8MUP2 240 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 WDR64B1ANS9 1081 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 SPINK2P20155 84 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 MAOBP27338 520 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 GRIA4P48058 902 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 ZNF423Q2M1K9 1284 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 SGO2Q562F6 1265 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 PRPF40BQ6NWY9 871 aaKnown RBP5.96□□□□□ -1.46
SCN3A-206ENST00000465043 DTX1Q86Y01 620 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 C2CD4AQ8NCU7 369 aaPredicted RBP5.96□□□□□ -1.46
SCN3A-206ENST00000465043 ALKBH8Q96BT7 664 aaKnown RBP5.96□□□□□ -1.46
SCN3A-206ENST00000465043 LEMD3Q9Y2U8 911 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 SYNGAP1Q96PV0 1343 aa5.96□□□□□ -1.46
SCN3A-206ENST00000465043 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 DLGAP3O95886 979 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 ADH5P11766 374 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 IRAK1P51617 712 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 CYP27A1Q02318 531 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 MAP7Q14244 749 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 SPRED3Q2MJR0 410 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 MCTP1Q6DN14 999 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 RETREG2Q8NC44 543 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 EZH1Q92800 747 aaPredicted RBP5.95□□□□□ -1.46
SCN3A-206ENST00000465043 MFSD14AQ96MC6 490 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 OSBPL1AQ9BXW6 950 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 RBCK1Q9BYM8 510 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 ZNF576Q9H609 170 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 RAD18Q9NS91 495 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 PPP4R2Q9NY27 417 aa5.95□□□□□ -1.46
SCN3A-206ENST00000465043 COL17A1Q9UMD9 1497 aaPredicted RBP5.95□□□□□ -1.46
SCN3A-206ENST00000465043 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.94□□□□□ -1.46
SCN3A-206ENST00000465043 EIF1AYO14602 144 aaKnown RBP5.94□□□□□ -1.46
SCN3A-206ENST00000465043 MED26O95402 600 aa5.94□□□□□ -1.46
SCN3A-206ENST00000465043 WNT11O96014 354 aa5.94□□□□□ -1.46
SCN3A-206ENST00000465043 DRD2P14416 443 aa5.94□□□□□ -1.46
SCN3A-206ENST00000465043 GP2P55259 537 aaKnown RBP5.94□□□□□ -1.46
SCN3A-206ENST00000465043 NFKBIBQ15653 356 aa5.94□□□□□ -1.46
SCN3A-206ENST00000465043 CCDC74AQ96AQ1 378 aa5.94□□□□□ -1.46
SCN3A-206ENST00000465043 NPHS2Q9NP85 383 aa5.94□□□□□ -1.46
SCN3A-206ENST00000465043 PAX4O43316 350 aa5.93□□□□□ -1.46
SCN3A-206ENST00000465043 GADD45BO75293 160 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-206ENST00000465043 XRCC5P13010 732 aaKnown RBP5.93□□□□□ -1.46
SCN3A-206ENST00000465043 FOSL1P15407 271 aa5.93□□□□□ -1.46
SCN3A-206ENST00000465043 ORC1Q13415 861 aa5.93□□□□□ -1.46
SCN3A-206ENST00000465043 USPL1Q5W0Q7 1092 aa5.93□□□□□ -1.46
SCN3A-206ENST00000465043 FAM9AQ8IZU1 332 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-206ENST00000465043 FBLIM1Q8WUP2 373 aa5.93□□□□□ -1.46
SCN3A-206ENST00000465043 ARID3AQ99856 593 aa5.93□□□□□ -1.46
SCN3A-206ENST00000465043 GNEQ9Y223 722 aaKnown RBP5.93□□□□□ -1.46
SCN3A-206ENST00000465043 HMGXB3Q12766 1538 aa5.93□□□□□ -1.46
SCN3A-206ENST00000465043 TMEM238LA0A1B0GVL6 79 aa5.92□□□□□ -1.46
SCN3A-206ENST00000465043 BRD1O95696 1058 aa5.92□□□□□ -1.46
SCN3A-206ENST00000465043 DUSP27Q5VZP5 1158 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms