RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CHD4Q14839 1912 aa21.9■■□□□ 1.1
TSPAN4-210ENST00000464987 C17orf53Q8N3J3 647 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-210ENST00000464987 SPC24Q8NBT2 197 aa21.9■■□□□ 1.1
TSPAN4-210ENST00000464987 SENP2Q9HC62 589 aa21.9■■□□□ 1.1
TSPAN4-210ENST00000464987 MROH5Q6ZUA9 1318 aa21.89■■□□□ 1.09
TSPAN4-210ENST00000464987 RXRAP19793 462 aa21.89■■□□□ 1.09
TSPAN4-210ENST00000464987 RASGRF1Q13972 1273 aa21.89■■□□□ 1.09
TSPAN4-210ENST00000464987 DNAJC25Q9H1X3 360 aa21.89■■□□□ 1.09
TSPAN4-210ENST00000464987 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 CAMTA2O94983 1202 aa21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 SIK1P57059 783 aa21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 TAF1P21675 1872 aa21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 KIAA2012Q0VF49 1180 aa21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 SNW1Q13573 536 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 SPATA5Q8NB90 893 aa21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 ORC3Q9UBD5 711 aaPredicted RBP21.88■■□□□ 1.09
TSPAN4-210ENST00000464987 A0A087WWV3 80 aa21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 B4E1Z4 1266 aa21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 POLR3DP05423 398 aaPredicted RBP21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 UQCRFS1P1P0C7P4 283 aa21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 STRBPQ96SI9 672 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 UTP14AQ9BVJ6 771 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 SASS6Q6UVJ0 657 aa21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 MAGEB6Q8N7X4 407 aa21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 C8orf76Q96K31 380 aa21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 ZNF396Q96N95 335 aaPredicted RBP21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 MPHOSPH8Q99549 860 aa21.87■■□□□ 1.09
TSPAN4-210ENST00000464987 NEDD4P46934 1319 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 ECM29Q5VYK3 1845 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 AIDAQ96BJ3 306 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 AIFM3Q96NN9 605 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 EPB41L4AQ9HCS5 686 aaPredicted RBP21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 SLC5A1P13866 664 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 ME1P48163 572 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 KCNF1Q9H3M0 494 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 CLIC4Q9Y696 253 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 TACC3Q9Y6A5 838 aa21.86■■□□□ 1.09
TSPAN4-210ENST00000464987 KIF28PB7ZC32 967 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 CPLX1O14810 134 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 BCAMP50895 628 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 TRDNQ13061 729 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 ENGASEQ8NFI3 743 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 FBXO18Q8NFZ0 1043 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 ERCC4Q92889 916 aaPredicted RBP21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 TAOK2Q9UL54 1235 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 PCDHA7Q9UN72 937 aa21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 NIP7Q9Y221 180 aaKnown RBP eCLIP21.85■■□□□ 1.09
TSPAN4-210ENST00000464987 RREB1Q92766 1687 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 KCNQ2O43526 872 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 ANGEL1Q9UNK9 670 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 SH2B2O14492 632 aaPredicted RBP21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 NTSR2O95665 410 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 ZNF165P49910 485 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 CTDSPL2Q05D32 466 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 CCDC144CPQ8IYA2 1237 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 PIBF1Q8WXW3 757 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 ARMT1Q9H993 441 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 WDR19Q8NEZ3 1342 aa21.84■■□□□ 1.09
TSPAN4-210ENST00000464987 NUTM2BA6NNL0 878 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 NUTM2EB1AL46 878 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 MBD4O95243 580 aa21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 CDC27P30260 824 aa21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 C11orf57Q6ZUT1 292 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 NUTM2AQ8IVF1 878 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 FSIP1Q8NA03 581 aa21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 AK7Q96M32 723 aa21.83■■□□□ 1.09
TSPAN4-210ENST00000464987 UBAP1LF5GYI3 381 aa21.83■■□□□ 1.08
TSPAN4-210ENST00000464987 PRKAB2O43741 272 aa21.83■■□□□ 1.08
TSPAN4-210ENST00000464987 DHX16O60231 1041 aaKnown RBP21.83■■□□□ 1.08
TSPAN4-210ENST00000464987 ATL3Q6DD88 541 aa21.83■■□□□ 1.08
TSPAN4-210ENST00000464987 IFNL3Q8IZI9 196 aa21.83■■□□□ 1.08
TSPAN4-210ENST00000464987 CASZ1Q86V15 1759 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 TPM2P07951 284 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 LINC00301Q8NCQ3 95 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 CHMP4CQ96CF2 233 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 MYL10Q9BUA6 226 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 RTEL1Q9NZ71 1219 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 LAMB2P55268 1798 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 WTIPA6NIX2 430 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 CCDC73Q6ZRK6 1079 aa21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 CDCA7Q9BWT1 371 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 IQSEC3Q9UPP2 1182 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-210ENST00000464987 A0A1B0GVL5 298 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 METAP2P50579 478 aaKnown RBP eCLIP21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 KCNQ4P56696 695 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 NOLC1Q14978 699 aaKnown RBP eCLIP21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 CCDC152Q4G0S7 254 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 APOA5Q6Q788 366 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 MICU3Q86XE3 530 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 TDRD7Q8NHU6 1098 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 IGDCC4Q8TDY8 1250 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 PHKBQ93100 1093 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 THRAP3Q9Y2W1 955 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 ZMYM6O95789 1325 aa21.81■■□□□ 1.08
TSPAN4-210ENST00000464987 PATL2C9JE40 543 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 UBE2Q2LH0YL09 131 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 FAM160A1Q05DH4 1040 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 MAP3K12Q12852 859 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 MYSM1Q5VVJ2 828 aa21.8■■□□□ 1.08
TSPAN4-210ENST00000464987 PYCARDQ9ULZ3 195 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms