RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 CLN3Q13286 438 aa6.94□□□□□ -1.3
BRCA1-206ENST00000461574 CACNA1SQ13698 1873 aa6.94□□□□□ -1.3
BRCA1-206ENST00000461574 ERVV-2B6SEH9 535 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
BRCA1-206ENST00000461574 LMNB1P20700 586 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 CYP2U1Q7Z449 544 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 NEDD1Q8NHV4 660 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 TRERF1Q96PN7 1200 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 OSBPL3Q9H4L5 887 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 ARHGEF10LQ9HCE6 1279 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 SRP68Q9UHB9 627 aaKnown RBP6.93□□□□□ -1.3
BRCA1-206ENST00000461574 PCDHB11Q9Y5F2 797 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 WASHC2AQ641Q2 1341 aa6.93□□□□□ -1.3
BRCA1-206ENST00000461574 USP42Q9H9J4 1324 aaKnown RBP6.93□□□□□ -1.3
BRCA1-206ENST00000461574 VIRMAQ69YN4 1812 aaKnown RBP6.92□□□□□ -1.3
BRCA1-206ENST00000461574 GLTPD2A6NH11 291 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 PHF20L1A8MW92 1017 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 SPATA31C2B4DYI2 1134 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 ITGB2P05107 769 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 MX2P20592 715 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 CRKLP46109 303 aaKnown RBP6.92□□□□□ -1.3
BRCA1-206ENST00000461574 DDR1Q08345 913 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 NR1H3Q13133 447 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 C1orf141Q5JVX7 400 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 ZNF530Q6P9A1 599 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-206ENST00000461574 BEND7Q8N7W2 519 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-206ENST00000461574 SLC4A9Q96Q91 983 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 TIMMDC1Q9NPL8 285 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 SCN11AQ9UI33 1791 aa6.92□□□□□ -1.3
BRCA1-206ENST00000461574 DICER1Q9UPY3 1922 aaKnown RBP6.91□□□□□ -1.3
BRCA1-206ENST00000461574 TRAK2O60296 914 aa6.91□□□□□ -1.3
BRCA1-206ENST00000461574 TNNT2P45379 298 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-206ENST00000461574 MTHFSP49914 203 aa6.91□□□□□ -1.3
BRCA1-206ENST00000461574 PLEKHO1Q53GL0 409 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-206ENST00000461574 AIDAQ96BJ3 306 aa6.91□□□□□ -1.3
BRCA1-206ENST00000461574 NUCKS1Q9H1E3 243 aaKnown RBP6.91□□□□□ -1.3
BRCA1-206ENST00000461574 RAB6BQ9NRW1 208 aa6.91□□□□□ -1.3
BRCA1-206ENST00000461574 MKRN1Q9UHC7 482 aaKnown RBP6.91□□□□□ -1.3
BRCA1-206ENST00000461574 KDM6AO15550 1401 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-206ENST00000461574 POLRMTO00411 1230 aaKnown RBP6.9□□□□□ -1.3
BRCA1-206ENST00000461574 GPR37L1O60883 481 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 F11P03951 625 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 THBS1P07996 1170 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 EIF4A2Q14240 407 aaKnown RBP6.9□□□□□ -1.3
BRCA1-206ENST00000461574 WDR44Q5JSH3 913 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 USPL1Q5W0Q7 1092 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 TAS1R3Q7RTX0 852 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 TTLL6Q8N841 843 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 IL27Q8NEV9 243 aa6.9□□□□□ -1.3
BRCA1-206ENST00000461574 ADAMTS7Q9UKP4 1686 aa6.9□□□□□ -1.31
BRCA1-206ENST00000461574 NRXN2Q9P2S2 1712 aa6.9□□□□□ -1.31
BRCA1-206ENST00000461574 H0YIN7 160 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 MSTNO14793 375 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 NPHP1O15259 732 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 MCCD1P59942 119 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-206ENST00000461574 AMOTQ4VCS5 1084 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 PODNQ7Z5L7 613 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 C2CD5Q86YS7 1000 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 SPOCK3Q9BQ16 436 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 FER1L6Q2WGJ9 1857 aa6.89□□□□□ -1.31
BRCA1-206ENST00000461574 COL11A2P13942 1736 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-206ENST00000461574 COL15A1P39059 1388 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 FOXN1O15353 648 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 OIP5O43482 229 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 IL2RAP01589 272 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 NFATC2IPQ8NCF5 419 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 CNKSR1Q969H4 720 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 GPAMQ9HCL2 828 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 POLKQ9UBT6 870 aa6.88□□□□□ -1.31
BRCA1-206ENST00000461574 NSFL1CQ9UNZ2 370 aaKnown RBP6.88□□□□□ -1.31
BRCA1-206ENST00000461574 ANKRD31Q8N7Z5 1873 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 SCN7AQ01118 1682 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 PROCP04070 461 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 SERPINB2P05120 415 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 TM4SF1P30408 202 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 PHKA2P46019 1235 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 CTCFP49711 727 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-206ENST00000461574 SNRPNP63162 240 aaKnown RBP6.87□□□□□ -1.31
BRCA1-206ENST00000461574 CENPCQ03188 943 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 NFIXQ14938 502 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 BICDL1Q6ZP65 573 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 ZNF622Q969S3 477 aaKnown RBP eCLIP6.87□□□□□ -1.31
BRCA1-206ENST00000461574 ESYT1Q9BSJ8 1104 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-206ENST00000461574 PRDM10Q9NQV6 1147 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 SCN4AP35499 1836 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 ARFGEF2Q9Y6D5 1785 aa6.87□□□□□ -1.31
BRCA1-206ENST00000461574 CNTNAP1P78357 1384 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 CARMIL3Q8ND23 1372 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 SOS1Q07889 1333 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-206ENST00000461574 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 SHISA8B8ZZ34 492 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 NFKBIEO00221 500 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 C21orf2O43822 256 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 ADAM23O75077 832 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 GNRH1P01148 92 aa6.86□□□□□ -1.31
BRCA1-206ENST00000461574 INTS5Q6P9B9 1019 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms